Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TBC1D3FA6NER0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 AC008550.1-201ENST00000511500 884 ntBASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TBC1D3FA6NER0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC027702.1-201ENST00000563810 1770 ntBASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 AC120498.8-201ENST00000614275 531 ntBASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TBC1D3FA6NER0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TBC1D3FA6NER0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TBC1D3FA6NER0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TBC1D3FA6NER0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TBC1D3FA6NER0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 AC121338.2-201ENST00000622535 1744 ntBASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 AL049796.1-201ENST00000565336 1766 ntBASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.26■□□□□ 0.83
TBC1D3FA6NER0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 LINC00565-201ENST00000562710 2331 ntBASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 AL596275.1-201ENST00000423464 877 ntBASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TBC1D3FA6NER0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms