Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 DUSP5P2-201ENST00000426873 1033 ntBASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV25A0A0B4J276 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 C2orf69P4-201ENST00000565394 541 ntBASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV25A0A0B4J276 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 MYC-209ENST00000641252 345 ntBASIC15.27■□□□□ 0.04
TRAV25A0A0B4J276 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV25A0A0B4J276 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV25A0A0B4J276 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
TRAV25A0A0B4J276 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV25A0A0B4J276 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV25A0A0B4J276 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 AC007225.1-201ENST00000566331 1836 ntBASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAV25A0A0B4J276 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms