Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC092431.2-201ENST00000441658 318 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 TRBV21-1-201ENST00000453262 348 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 AC106868.1-201ENST00000505272 992 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AF186996.2-201ENST00000508347 907 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AC091901.1-201ENST00000517722 736 ntTSL 3 BASIC9.26□□□□□ -0.93
UBE4BO95155 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 FOXG1-AS1-201ENST00000546560 538 ntTSL 3 BASIC9.26□□□□□ -0.93
UBE4BO95155 APOOP5-202ENST00000564761 566 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AC091147.1-201ENST00000583290 510 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC9.26□□□□□ -0.93
UBE4BO95155 AC008751.1-201ENST00000600438 342 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AL358335.3-201ENST00000604678 327 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AL133464.1-204ENST00000634280 1094 ntTSL 5 BASIC9.26□□□□□ -0.93
UBE4BO95155 OR7E122P-202ENST00000641144 6171 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 AC073349.2-201ENST00000427545 1603 ntBASIC9.26□□□□□ -0.93
UBE4BO95155 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
UBE4BO95155 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
UBE4BO95155 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE4BO95155 HERC2P8-202ENST00000564334 3705 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC9.25□□□□□ -0.93
UBE4BO95155 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC9.25□□□□□ -0.93
UBE4BO95155 BMS1P1-201ENST00000374336 1332 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
UBE4BO95155 TMEM97-202ENST00000336687 2115 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 OR51E1-202ENST00000530215 2942 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 AC092656.1-201ENST00000503243 2097 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE4BO95155 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 RN7SKP133-201ENST00000364845 340 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 NIP7P3-201ENST00000404319 515 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE4BO95155 PIGX-204ENST00000421265 677 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE4BO95155 AC116609.1-201ENST00000425850 535 ntTSL 4 BASIC9.25□□□□□ -0.93
UBE4BO95155 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC9.25□□□□□ -0.93
UBE4BO95155 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC9.25□□□□□ -0.93
UBE4BO95155 CHRM3-AS1-201ENST00000444721 486 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE4BO95155 AL389885.1-201ENST00000447227 384 ntTSL 3 BASIC9.25□□□□□ -0.93
UBE4BO95155 SEPHS1P7-201ENST00000452995 1177 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 RN7SL63P-201ENST00000468228 304 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 RN7SL841P-201ENST00000470547 297 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 RPL12P21-201ENST00000472214 518 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC9.25□□□□□ -0.93
UBE4BO95155 HTR4-204ENST00000517929 1201 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC9.25□□□□□ -0.93
UBE4BO95155 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC9.25□□□□□ -0.93
UBE4BO95155 AC096708.1-201ENST00000584419 658 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 AC087393.3-201ENST00000584971 166 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 AC067904.3-201ENST00000617126 261 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 AP000280.1-201ENST00000624800 832 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 AC079416.2-201ENST00000625035 1193 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC9.25□□□□□ -0.93
UBE4BO95155 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC9.25□□□□□ -0.93
UBE4BO95155 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
UBE4BO95155 AC068733.1-202ENST00000531479 2456 ntBASIC9.25□□□□□ -0.93
UBE4BO95155 SMARCAL1-202ENST00000358207 3056 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 NXPE3-207ENST00000616286 1832 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 AL356289.3-201ENST00000640049 2669 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 MYH2-206ENST00000622564 2379 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 AL512504.2-201ENST00000445455 1909 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
UBE4BO95155 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
UBE4BO95155 MT-TS1-201ENST00000387416 69 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 TMEM97P1-201ENST00000452969 451 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 CTNND2-205ENST00000503622 2982 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC9.24□□□□□ -0.93
UBE4BO95155 AC104117.2-201ENST00000523735 515 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 AC005552.1-201ENST00000577556 662 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 MIR3680-2-201ENST00000578247 87 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 MIR3680-1-201ENST00000581433 87 ntBASIC9.24□□□□□ -0.93
UBE4BO95155 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC9.24□□□□□ -0.93
UBE4BO95155 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms