Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 AC024082.1-201ENST00000435250 699 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 AP001171.1-201ENST00000436373 864 ntTSL 2 BASIC9□□□□□ -0.97
LMO3Q8TAP4 ASH2LP1-201ENST00000438037 985 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC9□□□□□ -0.97
LMO3Q8TAP4 SEPHS1P7-201ENST00000452995 1177 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 RPSAP54-201ENST00000454001 886 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 RPL3P10-201ENST00000476002 1164 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 RPL36P16-201ENST00000496996 306 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 HNRNPA1P38-201ENST00000523612 957 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 FABP5P7-201ENST00000524732 405 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 SCML2P1-201ENST00000584511 1100 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 OR7D1P-201ENST00000592739 933 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 AC009159.3-201ENST00000615570 804 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 AC002540.1-201ENST00000625023 1349 ntBASIC9□□□□□ -0.97
LMO3Q8TAP4 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 RBMS3-203ENST00000383767 1864 ntTSL 1 (best) BASIC9□□□□□ -0.97
LMO3Q8TAP4 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 MS4A6A-203ENST00000426738 1736 ntTSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 GRIA3-209ENST00000622768 5173 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
LMO3Q8TAP4 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 ZNF826P-204ENST00000597334 1446 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 ASH1L-201ENST00000368346 11942 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 CCDC14-203ENST00000409697 2962 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 SNORA14B-201ENST00000384452 135 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 MIR1269A-201ENST00000408636 105 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 SNORA73.3-201ENST00000410213 189 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AL160153.1-201ENST00000415285 429 ntTSL 3 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 GACAT1-201ENST00000419650 577 ntTSL 4 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AL035417.1-201ENST00000442754 214 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 PHBP9-201ENST00000453578 825 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 RN7SL571P-201ENST00000468302 295 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 IGLV7-35-201ENST00000523314 340 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AP001767.2-201ENST00000527291 382 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 HLA-P-207ENST00000568192 747 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC022148.2-201ENST00000586176 560 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 MRPS5P4-201ENST00000592830 325 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 SATB1-AS1-212ENST00000596152 610 ntTSL 5 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC073534.1-201ENST00000598671 1056 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 AC106782.6-201ENST00000611264 512 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 LINC02391-201ENST00000615716 800 ntTSL 5 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 MAGEB3-202ENST00000620842 1129 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 TRIM51EP-201ENST00000524374 1516 ntBASIC8.99□□□□□ -0.97
LMO3Q8TAP4 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.99□□□□□ -0.97
LMO3Q8TAP4 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC078795.1-201ENST00000602342 3143 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 ZNF217-202ENST00000371471 5796 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC010680.2-201ENST00000603521 2117 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 DCLRE1C-209ENST00000378278 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms