Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP4B1Q9Y6B7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP4B1Q9Y6B7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.49■□□□□ 0.71
AP4B1Q9Y6B7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP4B1Q9Y6B7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP4B1Q9Y6B7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 LINC02228-203ENST00000641970 1355 ntBASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 AP000974.1-201ENST00000623909 2387 ntBASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP4B1Q9Y6B7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 AC007225.1-201ENST00000566331 1836 ntBASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 TNXA-203ENST00000507684 2038 ntBASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 MIR5787-201ENST00000611784 55 ntBASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
AP4B1Q9Y6B7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 AL034346.1-201ENST00000568244 1277 ntBASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 AC004408.2-201ENST00000623613 2777 ntBASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
AP4B1Q9Y6B7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 AC009237.3-201ENST00000393279 1427 ntBASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 TPRG1LP1-201ENST00000598702 760 ntBASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
AP4B1Q9Y6B7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms