Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 AL390719.1-204ENST00000412397 1219 ntBASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 AC005829.2-201ENST00000571422 1056 ntBASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 LINC01023-201ENST00000606054 436 ntBASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHB12Q9Y5F1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 AL135905.2-201ENST00000584934 1404 ntBASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
PCDHB12Q9Y5F1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 AC110285.5-201ENST00000611501 352 ntBASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 AC006557.6-201ENST00000623071 864 ntBASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHB12Q9Y5F1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 FAM210CP-201ENST00000445714 574 ntBASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB12Q9Y5F1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 AC007375.3-201ENST00000600936 2314 ntBASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 TSPY7P-201ENST00000431358 1114 ntBASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 BX088651.1-201ENST00000540551 451 ntBASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB12Q9Y5F1 AL049637.2-201ENST00000641778 930 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms