Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 KRT17P2-201ENST00000300992 1314 ntBASIC22.02■■□□□ 1.12
PCDHB7Q9Y5E2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.11
PCDHB7Q9Y5E2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PCDHB7Q9Y5E2 AC011484.1-201ENST00000377652 1995 ntBASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 AL135905.2-201ENST00000584934 1404 ntBASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 ECEL1P3-201ENST00000427961 737 ntBASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHB7Q9Y5E2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 TSPY7P-201ENST00000431358 1114 ntBASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHB7Q9Y5E2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 AC211429.1-201ENST00000415277 523 ntBASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 PRKY-204ENST00000533551 1019 ntBASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 AL049637.2-201ENST00000641778 930 ntBASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHB7Q9Y5E2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHB7Q9Y5E2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHB7Q9Y5E2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB7Q9Y5E2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB7Q9Y5E2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB7Q9Y5E2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHB7Q9Y5E2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PCDHB7Q9Y5E2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHB7Q9Y5E2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms