Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 AC092118.2-201ENST00000613495 667 ntBASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 AC073314.1-201ENST00000568729 2216 ntBASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
GTF3C4Q9UKN8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
GTF3C4Q9UKN8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 AC100791.3-201ENST00000617619 330 ntBASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
GTF3C4Q9UKN8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GTF3C4Q9UKN8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
GTF3C4Q9UKN8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
GTF3C4Q9UKN8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
GTF3C4Q9UKN8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.89■■□□□ 1.1
GTF3C4Q9UKN8 AC092667.1-201ENST00000434301 2586 ntBASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 KRT18P6-201ENST00000555540 1265 ntBASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 KRT17P1-201ENST00000399211 1546 ntBASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.89■■□□□ 1.09
GTF3C4Q9UKN8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 CYP2T3P-201ENST00000601990 817 ntBASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
GTF3C4Q9UKN8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
GTF3C4Q9UKN8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
GTF3C4Q9UKN8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms