Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.14■□□□□ 0.33
UBQLN2Q9UHD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 AC004448.1-201ENST00000458332 883 ntBASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
UBQLN2Q9UHD9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
UBQLN2Q9UHD9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 AC005332.7-201ENST00000614046 2005 ntBASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 AL032819.2-201ENST00000624543 2162 ntBASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBQLN2Q9UHD9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBQLN2Q9UHD9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms