Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EBF1Q9UH73 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.76■□□□□ 0.91
EBF1Q9UH73 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EBF1Q9UH73 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EBF1Q9UH73 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.75■□□□□ 0.91
EBF1Q9UH73 AC105020.6-201ENST00000621523 1217 ntBASIC20.75■□□□□ 0.91
EBF1Q9UH73 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.75■□□□□ 0.91
EBF1Q9UH73 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.75■□□□□ 0.91
EBF1Q9UH73 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
EBF1Q9UH73 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 ECEL1P3-201ENST00000427961 737 ntBASIC20.74■□□□□ 0.91
EBF1Q9UH73 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EBF1Q9UH73 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.74■□□□□ 0.91
EBF1Q9UH73 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 AC211429.1-201ENST00000415277 523 ntBASIC20.73■□□□□ 0.91
EBF1Q9UH73 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.73■□□□□ 0.91
EBF1Q9UH73 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EBF1Q9UH73 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 AC012618.2-201ENST00000428058 849 ntBASIC20.72■□□□□ 0.91
EBF1Q9UH73 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 FAM210CP-201ENST00000445714 574 ntBASIC20.72■□□□□ 0.91
EBF1Q9UH73 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.72■□□□□ 0.91
EBF1Q9UH73 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EBF1Q9UH73 AC242852.2-201ENST00000615738 1807 ntBASIC20.71■□□□□ 0.91
EBF1Q9UH73 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EBF1Q9UH73 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
EBF1Q9UH73 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EBF1Q9UH73 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms