Protein–RNA interactions for Protein: Q9NY27

PPP4R2, Serine/threonine-protein phosphatase 4 regulatory subunit 2, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R2Q9NY27 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R2Q9NY27 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PPP4R2Q9NY27 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC26.07■■□□□ 1.76
PPP4R2Q9NY27 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 AL691432.2-201ENST00000607222 2038 ntBASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PPP4R2Q9NY27 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PPP4R2Q9NY27 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.05■■□□□ 1.76
PPP4R2Q9NY27 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PPP4R2Q9NY27 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PPP4R2Q9NY27 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PPP4R2Q9NY27 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PPP4R2Q9NY27 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 EEF1DP3-203ENST00000566025 782 ntBASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 TREX1-205ENST00000625293 1783 ntBASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PPP4R2Q9NY27 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PPP4R2Q9NY27 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 AC053503.5-201ENST00000601508 636 ntBASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 SF1-220ENST00000626028 704 ntTSL 2 BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PPP4R2Q9NY27 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
PPP4R2Q9NY27 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
PPP4R2Q9NY27 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.76
PPP4R2Q9NY27 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
PPP4R2Q9NY27 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R2Q9NY27 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R2Q9NY27 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26■■□□□ 1.75
PPP4R2Q9NY27 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PPP4R2Q9NY27 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26■■□□□ 1.75
PPP4R2Q9NY27 OR2A1-AS1-204ENST00000470435 602 ntBASIC26■■□□□ 1.75
PPP4R2Q9NY27 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC26■■□□□ 1.75
PPP4R2Q9NY27 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PPP4R2Q9NY27 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms