Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.21■□□□□ 0.35
HES4Q9HCC6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.21■□□□□ 0.35
HES4Q9HCC6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.21■□□□□ 0.35
HES4Q9HCC6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.21■□□□□ 0.35
HES4Q9HCC6 AC022517.1-201ENST00000592429 346 ntBASIC17.21■□□□□ 0.35
HES4Q9HCC6 AC011767.1-201ENST00000617410 1153 ntBASIC17.21■□□□□ 0.35
HES4Q9HCC6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HES4Q9HCC6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HES4Q9HCC6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HES4Q9HCC6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.21■□□□□ 0.34
HES4Q9HCC6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.21■□□□□ 0.34
HES4Q9HCC6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 BID-214ENST00000617586 542 ntTSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HES4Q9HCC6 AC092667.1-201ENST00000434301 2586 ntBASIC17.2■□□□□ 0.34
HES4Q9HCC6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HES4Q9HCC6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HES4Q9HCC6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HES4Q9HCC6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HES4Q9HCC6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HES4Q9HCC6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HES4Q9HCC6 KRT8P36-201ENST00000489121 1440 ntBASIC17.19■□□□□ 0.34
HES4Q9HCC6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HES4Q9HCC6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.19■□□□□ 0.34
HES4Q9HCC6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 AC092720.2-201ENST00000602388 1665 ntBASIC17.18■□□□□ 0.34
HES4Q9HCC6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 AC016405.3-201ENST00000607710 860 ntBASIC17.18■□□□□ 0.34
HES4Q9HCC6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 AC068338.2-201ENST00000563278 1430 ntBASIC17.18■□□□□ 0.34
HES4Q9HCC6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
HES4Q9HCC6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HES4Q9HCC6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HES4Q9HCC6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HES4Q9HCC6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HES4Q9HCC6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
HES4Q9HCC6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HES4Q9HCC6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HES4Q9HCC6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HES4Q9HCC6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HES4Q9HCC6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms