Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 AL138724.1-201ENST00000606771 1088 ntBASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.62□□□□□ -0.23
SND1-IT1Q9HBX3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SND1-IT1Q9HBX3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 AC116562.4-201ENST00000641316 2276 ntBASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 SLC47A1P1-202ENST00000449666 945 ntBASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 SYT6-210ENST00000641643 1587 ntBASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SND1-IT1Q9HBX3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 SERBP1P1-201ENST00000396021 1160 ntBASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 AC136469.2-201ENST00000623944 1028 ntBASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 AC098818.2-201ENST00000564925 2320 ntBASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SND1-IT1Q9HBX3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
SND1-IT1Q9HBX3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms