Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 KRT17P2-201ENST00000300992 1314 ntBASIC21.09■□□□□ 0.97
BRD9Q9H8M2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 LINC01023-201ENST00000606054 436 ntBASIC21.09■□□□□ 0.97
BRD9Q9H8M2 AC124016.1-201ENST00000609552 612 ntBASIC21.09■□□□□ 0.97
BRD9Q9H8M2 AC120498.8-201ENST00000614275 531 ntBASIC21.09■□□□□ 0.97
BRD9Q9H8M2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 FBXW4P1-201ENST00000426721 2239 ntBASIC21.09■□□□□ 0.97
BRD9Q9H8M2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
BRD9Q9H8M2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
BRD9Q9H8M2 AC006557.6-201ENST00000623071 864 ntBASIC21.08■□□□□ 0.97
BRD9Q9H8M2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.08■□□□□ 0.96
BRD9Q9H8M2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
BRD9Q9H8M2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 TSPY7P-201ENST00000431358 1114 ntBASIC21.07■□□□□ 0.96
BRD9Q9H8M2 FAM210CP-201ENST00000445714 574 ntBASIC21.07■□□□□ 0.96
BRD9Q9H8M2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 AC133681.1-201ENST00000465482 601 ntBASIC21.07■□□□□ 0.96
BRD9Q9H8M2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 AP001412.1-201ENST00000608405 714 ntBASIC21.07■□□□□ 0.96
BRD9Q9H8M2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.07■□□□□ 0.96
BRD9Q9H8M2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 AL390719.1-204ENST00000412397 1219 ntBASIC21.06■□□□□ 0.96
BRD9Q9H8M2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 BX088651.1-201ENST00000540551 451 ntBASIC21.06■□□□□ 0.96
BRD9Q9H8M2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 AC005829.2-201ENST00000571422 1056 ntBASIC21.06■□□□□ 0.96
BRD9Q9H8M2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.06■□□□□ 0.96
BRD9Q9H8M2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BRD9Q9H8M2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms