Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN3Q9H347 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBQLN3Q9H347 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 SLC29A4P1-201ENST00000398760 971 ntBASIC18.84■□□□□ 0.61
UBQLN3Q9H347 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 AC093787.1-201ENST00000450396 207 ntBASIC18.84■□□□□ 0.61
UBQLN3Q9H347 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.84■□□□□ 0.61
UBQLN3Q9H347 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.83■□□□□ 0.61
UBQLN3Q9H347 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.83■□□□□ 0.61
UBQLN3Q9H347 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
UBQLN3Q9H347 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN3Q9H347 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN3Q9H347 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 FAM21FP-204ENST00000608637 956 ntBASIC18.83■□□□□ 0.6
UBQLN3Q9H347 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN3Q9H347 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 AL138781.1-201ENST00000566567 1274 ntBASIC18.82■□□□□ 0.6
UBQLN3Q9H347 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 MKRN4P-201ENST00000444706 1521 ntBASIC18.82■□□□□ 0.6
UBQLN3Q9H347 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN3Q9H347 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.81■□□□□ 0.6
UBQLN3Q9H347 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 CDV3P1-201ENST00000471403 739 ntBASIC18.81■□□□□ 0.6
UBQLN3Q9H347 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN3Q9H347 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms