Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS11Q9H270 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
VPS11Q9H270 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VPS11Q9H270 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
VPS11Q9H270 POU5F1P4-201ENST00000413175 1085 ntBASIC20.44■□□□□ 0.86
VPS11Q9H270 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.44■□□□□ 0.86
VPS11Q9H270 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS11Q9H270 SUDS3P1-201ENST00000505831 966 ntBASIC20.44■□□□□ 0.86
VPS11Q9H270 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS11Q9H270 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.44■□□□□ 0.86
VPS11Q9H270 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS11Q9H270 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.44■□□□□ 0.86
VPS11Q9H270 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
VPS11Q9H270 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VPS11Q9H270 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 AC087289.5-201ENST00000586076 3175 ntBASIC20.43■□□□□ 0.86
VPS11Q9H270 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.43■□□□□ 0.86
VPS11Q9H270 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.43■□□□□ 0.86
VPS11Q9H270 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS11Q9H270 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS11Q9H270 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS11Q9H270 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VPS11Q9H270 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.43■□□□□ 0.86
VPS11Q9H270 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
VPS11Q9H270 KRT87P-202ENST00000534226 1464 ntBASIC20.43■□□□□ 0.86
VPS11Q9H270 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VPS11Q9H270 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS11Q9H270 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS11Q9H270 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS11Q9H270 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS11Q9H270 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.42■□□□□ 0.86
VPS11Q9H270 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.42■□□□□ 0.86
VPS11Q9H270 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.42■□□□□ 0.86
VPS11Q9H270 AL358852.1-201ENST00000623174 1268 ntBASIC20.42■□□□□ 0.86
VPS11Q9H270 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VPS11Q9H270 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.41■□□□□ 0.86
VPS11Q9H270 BX323043.1-201ENST00000641006 1765 ntBASIC20.41■□□□□ 0.86
VPS11Q9H270 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VPS11Q9H270 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.41■□□□□ 0.86
VPS11Q9H270 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS11Q9H270 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.41■□□□□ 0.86
VPS11Q9H270 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VPS11Q9H270 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.4■□□□□ 0.86
VPS11Q9H270 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
VPS11Q9H270 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS11Q9H270 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.4■□□□□ 0.86
VPS11Q9H270 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.4■□□□□ 0.86
VPS11Q9H270 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.4■□□□□ 0.86
VPS11Q9H270 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 AC092720.2-201ENST00000602388 1665 ntBASIC20.4■□□□□ 0.86
VPS11Q9H270 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.4■□□□□ 0.86
VPS11Q9H270 RARRES2P11-201ENST00000635158 484 ntBASIC20.4■□□□□ 0.86
VPS11Q9H270 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VPS11Q9H270 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
VPS11Q9H270 AC018445.3-201ENST00000624177 1945 ntBASIC20.39■□□□□ 0.86
VPS11Q9H270 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.39■□□□□ 0.86
VPS11Q9H270 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VPS11Q9H270 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.39■□□□□ 0.86
VPS11Q9H270 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms