Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.39■■□□□ 1.49
LSG1Q9H089 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LSG1Q9H089 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LSG1Q9H089 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.38■■□□□ 1.49
LSG1Q9H089 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.38■■□□□ 1.49
LSG1Q9H089 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSG1Q9H089 AC112907.3-201ENST00000577781 2400 ntBASIC24.38■■□□□ 1.49
LSG1Q9H089 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.38■■□□□ 1.49
LSG1Q9H089 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
LSG1Q9H089 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSG1Q9H089 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSG1Q9H089 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.38■■□□□ 1.49
LSG1Q9H089 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LSG1Q9H089 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.37■■□□□ 1.49
LSG1Q9H089 AC004911.1-201ENST00000416316 871 ntBASIC24.37■■□□□ 1.49
LSG1Q9H089 CYP2T1P-201ENST00000432607 1285 ntBASIC24.37■■□□□ 1.49
LSG1Q9H089 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.37■■□□□ 1.49
LSG1Q9H089 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.37■■□□□ 1.49
LSG1Q9H089 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
LSG1Q9H089 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LSG1Q9H089 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LSG1Q9H089 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
LSG1Q9H089 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
LSG1Q9H089 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
LSG1Q9H089 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LSG1Q9H089 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
LSG1Q9H089 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
LSG1Q9H089 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.36■■□□□ 1.49
LSG1Q9H089 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.36■■□□□ 1.49
LSG1Q9H089 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.36■■□□□ 1.49
LSG1Q9H089 AL356652.1-201ENST00000615962 565 ntBASIC24.36■■□□□ 1.49
LSG1Q9H089 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSG1Q9H089 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.35■■□□□ 1.49
LSG1Q9H089 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
LSG1Q9H089 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.35■■□□□ 1.49
LSG1Q9H089 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LSG1Q9H089 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC24.35■■□□□ 1.49
LSG1Q9H089 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.35■■□□□ 1.49
LSG1Q9H089 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.34■■□□□ 1.49
LSG1Q9H089 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC24.34■■□□□ 1.49
LSG1Q9H089 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
LSG1Q9H089 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
LSG1Q9H089 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.34■■□□□ 1.49
LSG1Q9H089 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
LSG1Q9H089 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC24.34■■□□□ 1.49
LSG1Q9H089 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 AC231657.2-201ENST00000624556 255 ntBASIC24.34■■□□□ 1.49
LSG1Q9H089 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
LSG1Q9H089 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
LSG1Q9H089 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
LSG1Q9H089 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.34■■□□□ 1.49
LSG1Q9H089 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.34■■□□□ 1.49
LSG1Q9H089 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.34■■□□□ 1.49
LSG1Q9H089 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
LSG1Q9H089 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.34■■□□□ 1.49
LSG1Q9H089 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC24.34■■□□□ 1.49
LSG1Q9H089 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC24.33■■□□□ 1.49
LSG1Q9H089 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LSG1Q9H089 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms