Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLIRPQ9GZT3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.94■□□□□ 0.46
SLIRPQ9GZT3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLIRPQ9GZT3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLIRPQ9GZT3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.93■□□□□ 0.46
SLIRPQ9GZT3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 AC074183.2-201ENST00000623112 922 ntBASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLIRPQ9GZT3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 BHLHE23-202ENST00000612929 1109 ntBASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 AC020916.1-201ENST00000587762 1774 ntBASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.91■□□□□ 0.46
SLIRPQ9GZT3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 AC079598.2-202ENST00000546624 1451 ntBASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 OR2I1P-207ENST00000453522 948 ntBASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLIRPQ9GZT3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.89■□□□□ 0.46
SLIRPQ9GZT3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.89■□□□□ 0.46
SLIRPQ9GZT3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.46
SLIRPQ9GZT3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLIRPQ9GZT3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms