Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
STRADBQ9C0K7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 FAM210CP-201ENST00000445714 574 ntBASIC19.41■□□□□ 0.7
STRADBQ9C0K7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 RARRES2P10-201ENST00000564312 460 ntBASIC19.41■□□□□ 0.7
STRADBQ9C0K7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
STRADBQ9C0K7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
STRADBQ9C0K7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
STRADBQ9C0K7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
STRADBQ9C0K7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
STRADBQ9C0K7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
STRADBQ9C0K7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.39■□□□□ 0.69
STRADBQ9C0K7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
STRADBQ9C0K7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
STRADBQ9C0K7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms