Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 AP001412.1-201ENST00000608405 714 ntBASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 AL135905.2-201ENST00000584934 1404 ntBASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC10.66□□□□□ -0.7
KRTAP4-1Q9BYQ7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 TMPOP1-202ENST00000424642 1267 ntBASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP4-1Q9BYQ7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP4-1Q9BYQ7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.65□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
KRTAP4-1Q9BYQ7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP4-1Q9BYQ7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC10.65□□□□□ -0.71
KRTAP4-1Q9BYQ7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP4-1Q9BYQ7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 HTR7P1-201ENST00000538670 1336 ntBASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 FAM197Y1-201ENST00000421178 764 ntBASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 AF186192.3-201ENST00000583427 947 ntBASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP4-1Q9BYQ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP4-1Q9BYQ7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP4-1Q9BYQ7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP4-1Q9BYQ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
KRTAP4-1Q9BYQ7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms