Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NDC1Q9BTX1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 AL049796.1-201ENST00000565336 1766 ntBASIC19.43■□□□□ 0.7
NDC1Q9BTX1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NDC1Q9BTX1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NDC1Q9BTX1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 TMEM191A-211ENST00000637163 1067 ntBASIC19.41■□□□□ 0.7
NDC1Q9BTX1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDC1Q9BTX1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.4■□□□□ 0.7
NDC1Q9BTX1 AL356652.1-201ENST00000615962 565 ntBASIC19.4■□□□□ 0.7
NDC1Q9BTX1 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDC1Q9BTX1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms