Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 KRT18P6-201ENST00000555540 1265 ntBASIC14.13□□□□□ -0.15
UPK3BQ9BT76 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UPK3BQ9BT76 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.12□□□□□ -0.15
UPK3BQ9BT76 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 CYP2T3P-201ENST00000601990 817 ntBASIC14.12□□□□□ -0.15
UPK3BQ9BT76 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UPK3BQ9BT76 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 LSM12P1-201ENST00000411836 588 ntBASIC14.11□□□□□ -0.15
UPK3BQ9BT76 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 CD99P1-205ENST00000527459 561 ntBASIC14.11□□□□□ -0.15
UPK3BQ9BT76 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 AL589743.5-201ENST00000616611 1050 ntBASIC14.11□□□□□ -0.15
UPK3BQ9BT76 MYC-209ENST00000641252 345 ntBASIC14.11□□□□□ -0.15
UPK3BQ9BT76 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.11□□□□□ -0.15
UPK3BQ9BT76 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 AC097658.1-201ENST00000475555 843 ntBASIC14.1□□□□□ -0.15
UPK3BQ9BT76 AC091874.3-201ENST00000512672 1195 ntBASIC14.1□□□□□ -0.15
UPK3BQ9BT76 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UPK3BQ9BT76 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms