Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CITED4Q96RK1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CITED4Q96RK1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CITED4Q96RK1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CITED4Q96RK1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CITED4Q96RK1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
CITED4Q96RK1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 OXCT2P1-201ENST00000447263 1535 ntBASIC17.34■□□□□ 0.37
CITED4Q96RK1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 AC090877.2-201ENST00000558441 1738 ntBASIC17.34■□□□□ 0.37
CITED4Q96RK1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CITED4Q96RK1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CITED4Q96RK1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.33■□□□□ 0.37
CITED4Q96RK1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CITED4Q96RK1 AP000997.3-201ENST00000623333 2250 ntBASIC17.33■□□□□ 0.37
CITED4Q96RK1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.33■□□□□ 0.37
CITED4Q96RK1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CITED4Q96RK1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CITED4Q96RK1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CITED4Q96RK1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CITED4Q96RK1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CITED4Q96RK1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CITED4Q96RK1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CITED4Q96RK1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 TSPY9P-201ENST00000440215 945 ntBASIC17.33■□□□□ 0.36
CITED4Q96RK1 TSPY11P-201ENST00000442607 1045 ntBASIC17.33■□□□□ 0.36
CITED4Q96RK1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CITED4Q96RK1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CITED4Q96RK1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.32■□□□□ 0.36
CITED4Q96RK1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CITED4Q96RK1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CITED4Q96RK1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.31■□□□□ 0.36
CITED4Q96RK1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.31■□□□□ 0.36
CITED4Q96RK1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CITED4Q96RK1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.31■□□□□ 0.36
CITED4Q96RK1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CITED4Q96RK1 AC021242.3-201ENST00000607598 1377 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms