Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZNF558Q96NG5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 AC011484.1-201ENST00000377652 1995 ntBASIC21.74■■□□□ 1.07
ZNF558Q96NG5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 FAM210CP-201ENST00000445714 574 ntBASIC21.74■■□□□ 1.07
ZNF558Q96NG5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 AC113410.3-201ENST00000623366 203 ntBASIC21.74■■□□□ 1.07
ZNF558Q96NG5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ZNF558Q96NG5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ZNF558Q96NG5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 ECEL1P1-201ENST00000373592 1742 ntBASIC21.72■■□□□ 1.07
ZNF558Q96NG5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.72■■□□□ 1.07
ZNF558Q96NG5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ZNF558Q96NG5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ZNF558Q96NG5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.7■■□□□ 1.06
ZNF558Q96NG5 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms