Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.51■■□□□ 1.03
CALR3Q96L12 AC104187.1-201ENST00000607510 612 ntBASIC21.51■■□□□ 1.03
CALR3Q96L12 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CALR3Q96L12 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.51■■□□□ 1.03
CALR3Q96L12 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.51■■□□□ 1.03
CALR3Q96L12 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.5■■□□□ 1.03
CALR3Q96L12 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 KRT8P36-201ENST00000489121 1440 ntBASIC21.5■■□□□ 1.03
CALR3Q96L12 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.5■■□□□ 1.03
CALR3Q96L12 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.5■■□□□ 1.03
CALR3Q96L12 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.5■■□□□ 1.03
CALR3Q96L12 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CALR3Q96L12 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.5■■□□□ 1.03
CALR3Q96L12 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.5■■□□□ 1.03
CALR3Q96L12 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CALR3Q96L12 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.5■■□□□ 1.03
CALR3Q96L12 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CALR3Q96L12 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CALR3Q96L12 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.49■■□□□ 1.03
CALR3Q96L12 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.49■■□□□ 1.03
CALR3Q96L12 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CALR3Q96L12 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CALR3Q96L12 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CALR3Q96L12 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 AC007322.3-201ENST00000426526 701 ntBASIC21.49■■□□□ 1.03
CALR3Q96L12 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CALR3Q96L12 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 SLC7A5P2-201ENST00000553010 536 ntBASIC21.49■■□□□ 1.03
CALR3Q96L12 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.49■■□□□ 1.03
CALR3Q96L12 FAM21FP-204ENST00000608637 956 ntBASIC21.49■■□□□ 1.03
CALR3Q96L12 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.49■■□□□ 1.03
CALR3Q96L12 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.49■■□□□ 1.03
CALR3Q96L12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CALR3Q96L12 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CALR3Q96L12 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CALR3Q96L12 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CALR3Q96L12 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.49■■□□□ 1.03
CALR3Q96L12 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.48■■□□□ 1.03
CALR3Q96L12 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
CALR3Q96L12 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CALR3Q96L12 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.48■■□□□ 1.03
CALR3Q96L12 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.48■■□□□ 1.03
CALR3Q96L12 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CALR3Q96L12 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CALR3Q96L12 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CALR3Q96L12 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.47■■□□□ 1.03
CALR3Q96L12 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.47■■□□□ 1.03
CALR3Q96L12 AC091799.1-201ENST00000422823 811 ntBASIC21.47■■□□□ 1.03
CALR3Q96L12 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.47■■□□□ 1.03
CALR3Q96L12 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CALR3Q96L12 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.46■■□□□ 1.03
CALR3Q96L12 RBM17P2-201ENST00000616397 1405 ntBASIC21.46■■□□□ 1.03
CALR3Q96L12 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CALR3Q96L12 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CALR3Q96L12 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CALR3Q96L12 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.46■■□□□ 1.03
CALR3Q96L12 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.46■■□□□ 1.03
CALR3Q96L12 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CALR3Q96L12 AC105265.2-201ENST00000467189 838 ntBASIC21.46■■□□□ 1.03
CALR3Q96L12 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.46■■□□□ 1.03
CALR3Q96L12 TERF1P2-201ENST00000583350 1212 ntBASIC21.46■■□□□ 1.03
CALR3Q96L12 AC005837.3-201ENST00000612163 286 ntBASIC21.46■■□□□ 1.03
CALR3Q96L12 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.46■■□□□ 1.03
CALR3Q96L12 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CALR3Q96L12 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CALR3Q96L12 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms