Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 AC087633.2-202ENST00000565166 1439 ntBASIC21.38■■□□□ 1.01
RNF139Q8WU17 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF139Q8WU17 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF139Q8WU17 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF139Q8WU17 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF139Q8WU17 AC027702.1-201ENST00000563810 1770 ntBASIC21.36■■□□□ 1.01
RNF139Q8WU17 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 DUSP5P2-201ENST00000426873 1033 ntBASIC21.35■■□□□ 1.01
RNF139Q8WU17 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 AC097658.1-201ENST00000475555 843 ntBASIC21.35■■□□□ 1.01
RNF139Q8WU17 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF139Q8WU17 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF139Q8WU17 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.34■■□□□ 1.01
RNF139Q8WU17 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 AC105020.6-201ENST00000621523 1217 ntBASIC21.34■■□□□ 1.01
RNF139Q8WU17 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF139Q8WU17 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF139Q8WU17 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF139Q8WU17 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.33■■□□□ 1.01
RNF139Q8WU17 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms