Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC018445.3-201ENST00000624177 1945 ntBASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPS4Y2Q8TD47 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 AL354811.1-201ENST00000610286 706 ntBASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPS4Y2Q8TD47 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 AL158211.5-201ENST00000623583 2518 ntBASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 TMEM179-206ENST00000616017 1645 ntBASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.8■□□□□ 0.44
RPS4Y2Q8TD47 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 AC010141.2-201ENST00000452426 721 ntBASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 KRT8P36-201ENST00000489121 1440 ntBASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPS4Y2Q8TD47 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 AC105265.2-201ENST00000467189 838 ntBASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RPS4Y2Q8TD47 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPS4Y2Q8TD47 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms