Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 AP000974.1-201ENST00000623909 2387 ntBASIC19.69■□□□□ 0.74
HIPK4Q8NE63 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIPK4Q8NE63 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 AC004408.2-201ENST00000623613 2777 ntBASIC19.68■□□□□ 0.74
HIPK4Q8NE63 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIPK4Q8NE63 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 AL158211.5-201ENST00000623583 2518 ntBASIC19.67■□□□□ 0.74
HIPK4Q8NE63 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 AL136116.3-201ENST00000402907 1138 ntBASIC19.67■□□□□ 0.74
HIPK4Q8NE63 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 AC133561.4-201ENST00000566112 224 ntBASIC19.67■□□□□ 0.74
HIPK4Q8NE63 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HIPK4Q8NE63 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 MIR4767-201ENST00000582827 78 ntBASIC19.66■□□□□ 0.74
HIPK4Q8NE63 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HIPK4Q8NE63 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms