Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAM1L1Q8N609 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAM1L1Q8N609 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TRAM1L1Q8N609 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.14■□□□□ 0.82
TRAM1L1Q8N609 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.14■□□□□ 0.82
TRAM1L1Q8N609 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 AC083880.1-201ENST00000608266 535 ntBASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAM1L1Q8N609 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRAM1L1Q8N609 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAM1L1Q8N609 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAM1L1Q8N609 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAM1L1Q8N609 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms