Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 BX664725.1-201ENST00000438252 379 ntBASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.88■□□□□ 0.45
LYSMD2Q8IV50 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYSMD2Q8IV50 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 AL451085.2-201ENST00000605085 799 ntBASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 Z82202.1-201ENST00000623446 1880 ntBASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 AL032819.2-201ENST00000624543 2162 ntBASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
LYSMD2Q8IV50 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 PCDHB18P-201ENST00000524813 2368 ntBASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 FZD10-202ENST00000539839 3282 ntBASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 AC133637.1-201ENST00000624115 1537 ntBASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LYSMD2Q8IV50 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 AL033527.3-201ENST00000566366 1196 ntBASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.84■□□□□ 0.45
LYSMD2Q8IV50 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms