Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPAS4Q8IUM7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
NPAS4Q8IUM7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.95■■□□□ 1.11
NPAS4Q8IUM7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 AC011484.1-201ENST00000377652 1995 ntBASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
NPAS4Q8IUM7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
NPAS4Q8IUM7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.93■■□□□ 1.1
NPAS4Q8IUM7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 AC023632.3-201ENST00000521633 145 ntBASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 AL121829.2-201ENST00000620908 328 ntBASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPAS4Q8IUM7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPAS4Q8IUM7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms