Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZNF546Q86UE3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZNF546Q86UE3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF546Q86UE3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZNF546Q86UE3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
ZNF546Q86UE3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.89■□□□□ 0.29
ZNF546Q86UE3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.89■□□□□ 0.29
ZNF546Q86UE3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZNF546Q86UE3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZNF546Q86UE3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ZNF546Q86UE3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms