Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP4R3CPQ6ZMV5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PPP4R3CPQ6ZMV5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 AL024507.2-201ENST00000606070 2574 ntBASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC123912.3-201ENST00000600907 1367 ntBASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC114495.2-201ENST00000452686 437 ntBASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC005229.4-201ENST00000610085 2198 ntBASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PPP4R3CPQ6ZMV5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC026185.1-201ENST00000445748 174 ntBASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC098826.2-201ENST00000452011 651 ntBASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 DUX4L16-201ENST00000555130 1264 ntBASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC002044.3-201ENST00000623314 541 ntBASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PPP4R3CPQ6ZMV5 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 ART2BP-201ENST00000453501 499 ntBASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 SEPT14P1-201ENST00000458703 648 ntBASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC016550.3-201ENST00000515706 767 ntBASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC008175.2-201ENST00000612840 297 ntBASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PPP4R3CPQ6ZMV5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 RNU6-673P-201ENST00000365084 104 ntBASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 POU5F1P4-201ENST00000413175 1085 ntBASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 AL162390.1-201ENST00000622201 1246 ntBASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.15■■□□□ 1.3
PPP4R3CPQ6ZMV5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PPP4R3CPQ6ZMV5 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PPP4R3CPQ6ZMV5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.14■■□□□ 1.3
PPP4R3CPQ6ZMV5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PPP4R3CPQ6ZMV5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 AP003168.1-201ENST00000530091 307 ntBASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 SLC7A5P2-201ENST00000553010 536 ntBASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PPP4R3CPQ6ZMV5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms