Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 DUX4L16-201ENST00000555130 1264 ntBASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FOXR2Q6PJQ5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 RARRES2P4-201ENST00000514074 484 ntBASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 SMG8-203ENST00000578922 2178 ntBASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FOXR2Q6PJQ5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 DPP3P2-201ENST00000416030 1696 ntBASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FOXR2Q6PJQ5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
FOXR2Q6PJQ5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
FOXR2Q6PJQ5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
FOXR2Q6PJQ5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 RARRES2P6-201ENST00000567333 442 ntBASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 AC068338.2-201ENST00000563278 1430 ntBASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 BX119927.1-201ENST00000636596 1552 ntBASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.2■■□□□ 1.14
FOXR2Q6PJQ5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 MCRIP2P1-201ENST00000394346 511 ntBASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
FOXR2Q6PJQ5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.18■■□□□ 1.14
FOXR2Q6PJQ5 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
FOXR2Q6PJQ5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms