Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.08■■□□□ 1.12
CNKSR3Q6P9H4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.08■■□□□ 1.12
CNKSR3Q6P9H4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CNKSR3Q6P9H4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 AC023632.3-201ENST00000521633 145 ntBASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.06■■□□□ 1.12
CNKSR3Q6P9H4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 NBPF21P-201ENST00000425093 1451 ntBASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CNKSR3Q6P9H4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 C9orf163-202ENST00000624034 2573 ntBASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 RN7SL850P-201ENST00000579959 291 ntBASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 AL445228.2-201ENST00000605589 952 ntBASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC22.04■■□□□ 1.12
CNKSR3Q6P9H4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 FAM197Y1-201ENST00000421178 764 ntBASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CNKSR3Q6P9H4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 AC242852.2-201ENST00000615738 1807 ntBASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.02■■□□□ 1.12
CNKSR3Q6P9H4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
CNKSR3Q6P9H4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.01■■□□□ 1.11
CNKSR3Q6P9H4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms