Protein–RNA interactions for Protein: Q5VVW2

GARNL3, GTPase-activating Rap/Ran-GAP domain-like protein 3, humanhuman

Predictions only

Length 1,013 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3Q5VVW2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 AC098934.4-201ENST00000564127 592 ntBASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 AL356652.1-201ENST00000615962 565 ntBASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GARNL3Q5VVW2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GARNL3Q5VVW2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
GARNL3Q5VVW2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 MIR2861-201ENST00000636310 90 ntBASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 AF106564.1-201ENST00000607058 2553 ntBASIC19.38■□□□□ 0.69
GARNL3Q5VVW2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GARNL3Q5VVW2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 KRT18P6-201ENST00000555540 1265 ntBASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GARNL3Q5VVW2 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 PLK5-205ENST00000642079 1969 ntBASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GARNL3Q5VVW2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms