Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KRTCAP3Q53RY4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 AC011484.1-201ENST00000377652 1995 ntBASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 PRKY-204ENST00000533551 1019 ntBASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 ECEL1P1-201ENST00000373592 1742 ntBASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KRTCAP3Q53RY4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 REXO1L12P-201ENST00000622156 912 ntBASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRTCAP3Q53RY4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
KRTCAP3Q53RY4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRTCAP3Q53RY4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KRTCAP3Q53RY4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KRTCAP3Q53RY4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 KRASP1-201ENST00000407852 552 ntBASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRTCAP3Q53RY4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms