Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 RRP6YOR001W 2202 nt1.92□□□□□ -2.1
DDC1Q08949 DPB11YJL090C 2295 nt1.92□□□□□ -2.1
DDC1Q08949 FKS1YLR342W 5631 nt1.92□□□□□ -2.1
DDC1Q08949 PTC5YOR090C 1719 nt1.91□□□□□ -2.1
DDC1Q08949 YMR045CYMR045C 5268 nt1.91□□□□□ -2.1
DDC1Q08949 IRC4YDR540C 540 nt1.91□□□□□ -2.1
DDC1Q08949 YAP3YHL009C 993 nt1.91□□□□□ -2.1
DDC1Q08949 YIL030W-AYIL030W-A 339 nt1.91□□□□□ -2.1
DDC1Q08949 VTI1YMR197C 654 nt1.91□□□□□ -2.1
DDC1Q08949 YOR032W-AYOR032W-A 201 nt1.91□□□□□ -2.1
DDC1Q08949 TOA1YOR194C 861 nt1.91□□□□□ -2.1
DDC1Q08949 IRC16YPR038W 360 nt1.91□□□□□ -2.1
DDC1Q08949 BRO1YPL084W 2535 nt1.91□□□□□ -2.1
DDC1Q08949 YJL070CYJL070C 2667 nt1.91□□□□□ -2.1
DDC1Q08949 ATG9YDL149W 2994 nt1.9□□□□□ -2.1
DDC1Q08949 MPH1YIR002C 2982 nt1.9□□□□□ -2.1
DDC1Q08949 TIM10YHR005C-A 282 nt1.9□□□□□ -2.11
DDC1Q08949 CMS1YLR003C 876 nt1.9□□□□□ -2.11
DDC1Q08949 CTK3YML112W 891 nt1.9□□□□□ -2.11
DDC1Q08949 YPL039WYPL039W 951 nt1.9□□□□□ -2.11
DDC1Q08949 YHR214C-BYHR214C-B 5382 nt1.9□□□□□ -2.11
DDC1Q08949 NAN1YPL126W 2691 nt1.9□□□□□ -2.11
DDC1Q08949 GCN2YDR283C 4980 nt1.9□□□□□ -2.11
DDC1Q08949 RVS161YCR009C 798 nt1.89□□□□□ -2.11
DDC1Q08949 YER084W-AYER084W-A 513 nt1.89□□□□□ -2.11
DDC1Q08949 YGL014C-AYGL014C-A 162 nt1.89□□□□□ -2.11
DDC1Q08949 COX13YGL191W 390 nt1.89□□□□□ -2.11
DDC1Q08949 RPL16AYIL133C 600 nt1.89□□□□□ -2.11
DDC1Q08949 YKL068W-AYKL068W-A 237 nt1.89□□□□□ -2.11
DDC1Q08949 YLR379WYLR379W 375 nt1.89□□□□□ -2.11
DDC1Q08949 DDR48YMR173W 1293 nt1.89□□□□□ -2.11
DDC1Q08949 PBI2YNL015W 228 nt1.89□□□□□ -2.11
DDC1Q08949 LSM7YNL147W 348 nt1.89□□□□□ -2.11
DDC1Q08949 YOR105WYOR105W 327 nt1.89□□□□□ -2.11
DDC1Q08949 FYV12YOR183W 390 nt1.89□□□□□ -2.11
DDC1Q08949 GIP3YPL137C 3831 nt1.89□□□□□ -2.11
DDC1Q08949 ATP15YPL271W 189 nt1.89□□□□□ -2.11
DDC1Q08949 SEC31YDL195W 3822 nt1.89□□□□□ -2.11
DDC1Q08949 NCL1YBL024W 2055 nt1.89□□□□□ -2.11
DDC1Q08949 DFG16YOR030W 1860 nt1.88□□□□□ -2.11
DDC1Q08949 YCR001WYCR001W 315 nt1.88□□□□□ -2.11
DDC1Q08949 RTR2YDR066C 591 nt1.88□□□□□ -2.11
DDC1Q08949 PKR1YMR123W 369 nt1.88□□□□□ -2.11
DDC1Q08949 URA10YMR271C 684 nt1.88□□□□□ -2.11
DDC1Q08949 RPB11YOL005C 363 nt1.88□□□□□ -2.11
DDC1Q08949 SAC3YDR159W 3906 nt1.88□□□□□ -2.11
DDC1Q08949 MDM32YOR147W 1869 nt1.88□□□□□ -2.11
DDC1Q08949 UTP13YLR222C 2454 nt1.88□□□□□ -2.11
DDC1Q08949 YDL025W-AYDL025W-A 105 nt1.87□□□□□ -2.11
DDC1Q08949 ASM4YDL088C 1587 nt1.87□□□□□ -2.11
DDC1Q08949 YJR157WYJR157W 363 nt1.87□□□□□ -2.11
DDC1Q08949 RUF22RUF22 515 nt1.87□□□□□ -2.11
DDC1Q08949 RPS7BYNL096C 573 nt1.87□□□□□ -2.11
DDC1Q08949 PDR8YLR266C 2106 nt1.87□□□□□ -2.11
DDC1Q08949 SPE1YKL184W 1401 nt1.86□□□□□ -2.11
DDC1Q08949 YJL127C-BYJL127C-B 159 nt1.86□□□□□ -2.11
DDC1Q08949 SPC1YJR010C-A 285 nt1.86□□□□□ -2.11
DDC1Q08949 TMA7YLR262C-A 195 nt1.86□□□□□ -2.11
DDC1Q08949 TOM22YNL131W 459 nt1.86□□□□□ -2.11
DDC1Q08949 SPC29YPL124W 762 nt1.86□□□□□ -2.11
DDC1Q08949 MET18YIL128W 3099 nt1.86□□□□□ -2.11
DDC1Q08949 BUD2YKL092C 3315 nt1.86□□□□□ -2.11
DDC1Q08949 DIS3YOL021C 3006 nt1.85□□□□□ -2.11
DDC1Q08949 CDC50YCR094W 1176 nt1.85□□□□□ -2.11
DDC1Q08949 YDL118WYDL118W 381 nt1.85□□□□□ -2.11
DDC1Q08949 BNA7YDR428C 786 nt1.85□□□□□ -2.11
DDC1Q08949 YER068C-AYER068C-A 432 nt1.85□□□□□ -2.11
DDC1Q08949 VAR1Q0140 1197 nt1.85□□□□□ -2.11
DDC1Q08949 MSL1YIR009W 336 nt1.85□□□□□ -2.11
DDC1Q08949 SNC1YAL030W 354 nt1.85□□□□□ -2.11
DDC1Q08949 YJR079WYJR079W 330 nt1.85□□□□□ -2.11
DDC1Q08949 LCL2YLR104W 396 nt1.85□□□□□ -2.11
DDC1Q08949 RPL37AYLR185W 267 nt1.85□□□□□ -2.11
DDC1Q08949 YPL197CYPL197C 414 nt1.85□□□□□ -2.11
DDC1Q08949 CDC53YDL132W 2448 nt1.85□□□□□ -2.11
DDC1Q08949 YHR214C-CYHR214C-C 1437 nt1.84□□□□□ -2.11
DDC1Q08949 ARP7YPR034W 1434 nt1.84□□□□□ -2.11
DDC1Q08949 NOP10YHR072W-A 177 nt1.84□□□□□ -2.11
DDC1Q08949 YHR130CYHR130C 336 nt1.84□□□□□ -2.11
DDC1Q08949 TIM8YJR135W-A 264 nt1.84□□□□□ -2.11
DDC1Q08949 YLR222C-AYLR222C-A 231 nt1.84□□□□□ -2.11
DDC1Q08949 SYM1YLR251W 594 nt1.84□□□□□ -2.11
DDC1Q08949 YOR192C-AYOR192C-A 1317 nt1.84□□□□□ -2.12
DDC1Q08949 IPT1YDR072C 1584 nt1.84□□□□□ -2.12
DDC1Q08949 KIP1YBL063W 3336 nt1.84□□□□□ -2.12
DDC1Q08949 RNH70YGR276C 1662 nt1.83□□□□□ -2.12
DDC1Q08949 BFA1YJR053W 1725 nt1.83□□□□□ -2.12
DDC1Q08949 YEL018C-AYEL018C-A 534 nt1.83□□□□□ -2.12
DDC1Q08949 SMB1YER029C 591 nt1.83□□□□□ -2.12
DDC1Q08949 BI2Q0110 1272 nt1.83□□□□□ -2.12
DDC1Q08949 YHR210CYHR210C 1026 nt1.83□□□□□ -2.12
DDC1Q08949 AIM29YKR074W 468 nt1.83□□□□□ -2.12
DDC1Q08949 YLR171WYLR171W 390 nt1.83□□□□□ -2.12
DDC1Q08949 NOP15YNL110C 663 nt1.83□□□□□ -2.12
DDC1Q08949 RPB5YBR154C 648 nt1.83□□□□□ -2.12
DDC1Q08949 MUD2YKL074C 1584 nt1.83□□□□□ -2.12
DDC1Q08949 NIC96YFR002W 2520 nt1.83□□□□□ -2.12
DDC1Q08949 YOR093CYOR093C 4947 nt1.83□□□□□ -2.12
DDC1Q08949 PEP1YBL017C 4740 nt1.83□□□□□ -2.12
DDC1Q08949 YGL024WYGL024W 336 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms