Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 BRP1YGL007W 378 nt2.08□□□□□ -2.08
RPN9Q04062 NOP10YHR072W-A 177 nt2.08□□□□□ -2.08
RPN9Q04062 RPL16AYIL133C 600 nt2.08□□□□□ -2.08
RPN9Q04062 YNL010WYNL010W 726 nt2.08□□□□□ -2.08
RPN9Q04062 VPH1YOR270C 2523 nt2.08□□□□□ -2.08
RPN9Q04062 RRF1YHR038W 693 nt2.07□□□□□ -2.08
RPN9Q04062 MSL1YIR009W 336 nt2.07□□□□□ -2.08
RPN9Q04062 FYV7YLR068W 456 nt2.07□□□□□ -2.08
RPN9Q04062 RMP1YLR145W 606 nt2.07□□□□□ -2.08
RPN9Q04062 RPS22BYLR367W 393 nt2.07□□□□□ -2.08
RPN9Q04062 CTK3YML112W 891 nt2.07□□□□□ -2.08
RPN9Q04062 PBI2YNL015W 228 nt2.07□□□□□ -2.08
RPN9Q04062 GAL7YBR018C 1101 nt2.07□□□□□ -2.08
RPN9Q04062 MF(ALPHA)1YPL187W 498 nt2.07□□□□□ -2.08
RPN9Q04062 MSS18YPR134W 807 nt2.07□□□□□ -2.08
RPN9Q04062 RUD3YOR216C 1455 nt2.07□□□□□ -2.08
RPN9Q04062 IPT1YDR072C 1584 nt2.06□□□□□ -2.08
RPN9Q04062 CHC1YGL206C 4962 nt2.06□□□□□ -2.08
RPN9Q04062 CDC53YDL132W 2448 nt2.06□□□□□ -2.08
RPN9Q04062 TRL1YJL087C 2484 nt2.06□□□□□ -2.08
RPN9Q04062 YGR045CYGR045C 363 nt2.06□□□□□ -2.08
RPN9Q04062 RPC10YHR143W-A 213 nt2.06□□□□□ -2.08
RPN9Q04062 NCE101YJL205C 162 nt2.06□□□□□ -2.08
RPN9Q04062 IRC19YLL033W 693 nt2.06□□□□□ -2.08
RPN9Q04062 YOR333CYOR333C 417 nt2.06□□□□□ -2.08
RPN9Q04062 SPE1YKL184W 1401 nt2.06□□□□□ -2.08
RPN9Q04062 RTT107YHR154W 3213 nt2.05□□□□□ -2.08
RPN9Q04062 RTT101YJL047C 2529 nt2.05□□□□□ -2.08
RPN9Q04062 EMP24YGL200C 612 nt2.05□□□□□ -2.08
RPN9Q04062 LCL2YLR104W 396 nt2.05□□□□□ -2.08
RPN9Q04062 GRX8YLR364W 330 nt2.05□□□□□ -2.08
RPN9Q04062 COX7YMR256C 183 nt2.05□□□□□ -2.08
RPN9Q04062 DGR1YNL130C-A 147 nt2.05□□□□□ -2.08
RPN9Q04062 PET123YOR158W 957 nt2.05□□□□□ -2.08
RPN9Q04062 COS111YBR203W 2775 nt2.04□□□□□ -2.08
RPN9Q04062 tT(UGU)Q1tT(UGU)Q1 76 nt2.04□□□□□ -2.08
RPN9Q04062 YJL016WYJL016W 1686 nt2.04□□□□□ -2.08
RPN9Q04062 YLR456WYLR456W 615 nt2.04□□□□□ -2.08
RPN9Q04062 SEN15YMR059W 387 nt2.04□□□□□ -2.08
RPN9Q04062 ATP19YOL077W-A 207 nt2.04□□□□□ -2.08
RPN9Q04062 RPB5YBR154C 648 nt2.04□□□□□ -2.08
RPN9Q04062 RGA1YOR127W 3024 nt2.04□□□□□ -2.08
RPN9Q04062 MNE1YOR350C 1992 nt2.03□□□□□ -2.08
RPN9Q04062 VPS8YAL002W 3825 nt2.03□□□□□ -2.08
RPN9Q04062 SMD1YGR074W 441 nt2.03□□□□□ -2.08
RPN9Q04062 VOA1YGR106C 798 nt2.03□□□□□ -2.08
RPN9Q04062 SIP18YMR175W 240 nt2.03□□□□□ -2.08
RPN9Q04062 YMR324CYMR324C 243 nt2.03□□□□□ -2.08
RPN9Q04062 RTC6YPL183W-A 282 nt2.03□□□□□ -2.08
RPN9Q04062 ROX1YPR065W 1107 nt2.03□□□□□ -2.08
RPN9Q04062 SOK2YMR016C 2358 nt2.03□□□□□ -2.08
RPN9Q04062 PUT3YKL015W 2940 nt2.03□□□□□ -2.08
RPN9Q04062 VMR1YHL035C 4779 nt2.02□□□□□ -2.09
RPN9Q04062 YEL030C-AYEL030C-A 315 nt2.02□□□□□ -2.09
RPN9Q04062 MXR1YER042W 555 nt2.02□□□□□ -2.09
RPN9Q04062 LSO2YGR169C-A 279 nt2.02□□□□□ -2.09
RPN9Q04062 RPF1YHR088W 888 nt2.02□□□□□ -2.09
RPN9Q04062 IRC10YOL015W 1761 nt2.02□□□□□ -2.09
RPN9Q04062 VPS52YDR484W 1926 nt2.01□□□□□ -2.09
RPN9Q04062 YER084W-AYER084W-A 513 nt2.01□□□□□ -2.09
RPN9Q04062 COX13YGL191W 390 nt2.01□□□□□ -2.09
RPN9Q04062 YHR071C-AYHR071C-A 321 nt2.01□□□□□ -2.09
RPN9Q04062 BIG1YHR101C 1008 nt2.01□□□□□ -2.09
RPN9Q04062 YKR075W-AYKR075W-A 270 nt2.01□□□□□ -2.09
RPN9Q04062 SLM6YBR266C 453 nt2.01□□□□□ -2.09
RPN9Q04062 UBR2YLR024C 5619 nt2.01□□□□□ -2.09
RPN9Q04062 KAP123YER110C 3342 nt2.01□□□□□ -2.09
RPN9Q04062 TUS1YLR425W 3924 nt2□□□□□ -2.09
RPN9Q04062 YBR012W-AYBR012W-A 1323 nt2□□□□□ -2.09
RPN9Q04062 YOR142W-AYOR142W-A 1323 nt2□□□□□ -2.09
RPN9Q04062 YPR158W-AYPR158W-A 1323 nt2□□□□□ -2.09
RPN9Q04062 UFD4YKL010C 4452 nt2□□□□□ -2.09
RPN9Q04062 YER188C-AYER188C-A 300 nt2□□□□□ -2.09
RPN9Q04062 HOP2YGL033W 657 nt2□□□□□ -2.09
RPN9Q04062 YBL012CYBL012C 402 nt2□□□□□ -2.09
RPN9Q04062 YMR052C-AYMR052C-A 366 nt2□□□□□ -2.09
RPN9Q04062 YCL023CYCL023C 348 nt2□□□□□ -2.09
RPN9Q04062 YOR343W-BYOR343W-B 5313 nt2□□□□□ -2.09
RPN9Q04062 SCH9YHR205W 2475 nt2□□□□□ -2.09
RPN9Q04062 SPO22YIL073C 2928 nt2□□□□□ -2.09
RPN9Q04062 CDC60YPL160W 3273 nt1.99□□□□□ -2.09
RPN9Q04062 SIR4YDR227W 4077 nt1.99□□□□□ -2.09
RPN9Q04062 SPC72YAL047C 1869 nt1.99□□□□□ -2.09
RPN9Q04062 GYP5YPL249C 2685 nt1.99□□□□□ -2.09
RPN9Q04062 MUD2YKL074C 1584 nt1.99□□□□□ -2.09
RPN9Q04062 YHR130CYHR130C 336 nt1.99□□□□□ -2.09
RPN9Q04062 RPI1YIL119C 1224 nt1.99□□□□□ -2.09
RPN9Q04062 YLR053CYLR053C 327 nt1.99□□□□□ -2.09
RPN9Q04062 SPC29YPL124W 762 nt1.99□□□□□ -2.09
RPN9Q04062 PPN1YDR452W 2025 nt1.99□□□□□ -2.09
RPN9Q04062 RNH70YGR276C 1662 nt1.99□□□□□ -2.09
RPN9Q04062 SHE9YDR393W 1371 nt1.98□□□□□ -2.09
RPN9Q04062 SSQ1YLR369W 1974 nt1.98□□□□□ -2.09
RPN9Q04062 YDR286CYDR286C 345 nt1.98□□□□□ -2.09
RPN9Q04062 YEL057CYEL057C 702 nt1.98□□□□□ -2.09
RPN9Q04062 BUD2YKL092C 3315 nt1.98□□□□□ -2.09
RPN9Q04062 YDL041WYDL041W 354 nt1.97□□□□□ -2.09
RPN9Q04062 snR79snR79 84 nt1.97□□□□□ -2.09
RPN9Q04062 YHR052W-AYHR052W-A 195 nt1.97□□□□□ -2.09
RPN9Q04062 YHR054W-AYHR054W-A 195 nt1.97□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 22.6 ms