Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGCS1Q01581 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
HMGCS1Q01581 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 MIR5787-201ENST00000611784 55 ntBASIC19.6■□□□□ 0.73
HMGCS1Q01581 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 SMG8-203ENST00000578922 2178 ntBASIC19.6■□□□□ 0.73
HMGCS1Q01581 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGCS1Q01581 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.6■□□□□ 0.73
HMGCS1Q01581 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCS1Q01581 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCS1Q01581 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 AC007322.3-201ENST00000426526 701 ntBASIC19.59■□□□□ 0.73
HMGCS1Q01581 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCS1Q01581 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 NTF6G-201ENST00000591094 616 ntBASIC19.59■□□□□ 0.73
HMGCS1Q01581 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCS1Q01581 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HMGCS1Q01581 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HMGCS1Q01581 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCS1Q01581 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCS1Q01581 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCS1Q01581 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCS1Q01581 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HMGCS1Q01581 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.58■□□□□ 0.73
HMGCS1Q01581 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.58■□□□□ 0.73
HMGCS1Q01581 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCS1Q01581 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HMGCS1Q01581 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HMGCS1Q01581 AC034268.1-201ENST00000441047 882 ntBASIC19.58■□□□□ 0.72
HMGCS1Q01581 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCS1Q01581 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCS1Q01581 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCS1Q01581 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCS1Q01581 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HMGCS1Q01581 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.58■□□□□ 0.72
HMGCS1Q01581 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.58■□□□□ 0.72
HMGCS1Q01581 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 MYCNOS-205ENST00000641950 531 ntBASIC19.57■□□□□ 0.72
HMGCS1Q01581 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HMGCS1Q01581 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
HMGCS1Q01581 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
HMGCS1Q01581 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms