Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEP78395 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRAMEP78395 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PRAMEP78395 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.49■□□□□ 0.87
PRAMEP78395 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PRAMEP78395 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRAMEP78395 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEP78395 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 AIRN-201ENST00000601203 4374 ntBASIC20.48■□□□□ 0.87
PRAMEP78395 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PRAMEP78395 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.48■□□□□ 0.87
PRAMEP78395 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.48■□□□□ 0.87
PRAMEP78395 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEP78395 AC013268.1-206ENST00000638368 961 ntBASIC20.48■□□□□ 0.87
PRAMEP78395 AC112229.1-201ENST00000639295 961 ntBASIC20.48■□□□□ 0.87
PRAMEP78395 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 AC020907.5-201ENST00000624372 1936 ntBASIC20.48■□□□□ 0.87
PRAMEP78395 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PRAMEP78395 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRAMEP78395 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PRAMEP78395 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
PRAMEP78395 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEP78395 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.47■□□□□ 0.87
PRAMEP78395 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
PRAMEP78395 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEP78395 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.47■□□□□ 0.87
PRAMEP78395 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
PRAMEP78395 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.47■□□□□ 0.87
PRAMEP78395 AL591742.1-201ENST00000604433 565 ntBASIC20.47■□□□□ 0.87
PRAMEP78395 MIR2861-201ENST00000636310 90 ntBASIC20.47■□□□□ 0.87
PRAMEP78395 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEP78395 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEP78395 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PRAMEP78395 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRAMEP78395 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PRAMEP78395 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEP78395 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.46■□□□□ 0.87
PRAMEP78395 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRAMEP78395 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEP78395 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PRAMEP78395 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PRAMEP78395 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.46■□□□□ 0.87
PRAMEP78395 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PRAMEP78395 MFSD11-216ENST00000590393 1141 ntBASIC20.46■□□□□ 0.87
PRAMEP78395 FAM21FP-204ENST00000608637 956 ntBASIC20.46■□□□□ 0.87
PRAMEP78395 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRAMEP78395 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
PRAMEP78395 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.87
PRAMEP78395 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
PRAMEP78395 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.45■□□□□ 0.86
PRAMEP78395 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEP78395 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PRAMEP78395 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
PRAMEP78395 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PRAMEP78395 RNF165-205ENST00000588679 2904 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms