Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SNRPEP62304 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
SNRPEP62304 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNRPEP62304 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SNRPEP62304 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNRPEP62304 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SNRPEP62304 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SNRPEP62304 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
SNRPEP62304 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 AP002365.1-201ENST00000603448 772 ntBASIC15.7■□□□□ 0.1
SNRPEP62304 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SNRPEP62304 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SNRPEP62304 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.7■□□□□ 0.1
SNRPEP62304 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNRPEP62304 HTR7P1-202ENST00000624664 4411 ntBASIC15.69■□□□□ 0.1
SNRPEP62304 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRPEP62304 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 AC141586.5-201ENST00000624546 2050 ntBASIC15.69■□□□□ 0.1
SNRPEP62304 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRPEP62304 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 AC007225.1-201ENST00000566331 1836 ntBASIC15.69■□□□□ 0.1
SNRPEP62304 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SNRPEP62304 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SNRPEP62304 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.69■□□□□ 0.1
SNRPEP62304 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SNRPEP62304 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
SNRPEP62304 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.68■□□□□ 0.1
SNRPEP62304 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRPEP62304 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.68■□□□□ 0.1
SNRPEP62304 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRPEP62304 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC15.68■□□□□ 0.1
SNRPEP62304 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SNRPEP62304 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SNRPEP62304 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.68■□□□□ 0.1
SNRPEP62304 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SNRPEP62304 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
SNRPEP62304 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 AC046158.3-201ENST00000624947 2558 ntBASIC15.68■□□□□ 0.1
SNRPEP62304 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SNRPEP62304 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRPEP62304 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.67■□□□□ 0.1
SNRPEP62304 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRPEP62304 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.67■□□□□ 0.1
SNRPEP62304 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SNRPEP62304 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms