Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATXN3P54252 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
ATXN3P54252 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN3P54252 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.71■□□□□ 0.91
ATXN3P54252 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.71■□□□□ 0.91
ATXN3P54252 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.71■□□□□ 0.91
ATXN3P54252 FAM197Y4-202ENST00000622692 608 ntBASIC20.71■□□□□ 0.91
ATXN3P54252 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.71■□□□□ 0.91
ATXN3P54252 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.71■□□□□ 0.91
ATXN3P54252 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATXN3P54252 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.71■□□□□ 0.91
ATXN3P54252 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.7■□□□□ 0.9
ATXN3P54252 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.7■□□□□ 0.9
ATXN3P54252 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN3P54252 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.7■□□□□ 0.9
ATXN3P54252 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.7■□□□□ 0.9
ATXN3P54252 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 AC244015.2-201ENST00000616358 1861 ntBASIC20.7■□□□□ 0.9
ATXN3P54252 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.7■□□□□ 0.9
ATXN3P54252 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
ATXN3P54252 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ATXN3P54252 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ATXN3P54252 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATXN3P54252 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.69■□□□□ 0.9
ATXN3P54252 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.69■□□□□ 0.9
ATXN3P54252 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.69■□□□□ 0.9
ATXN3P54252 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ATXN3P54252 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATXN3P54252 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.68■□□□□ 0.9
ATXN3P54252 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN3P54252 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 AC243732.1-201ENST00000612648 864 ntBASIC20.68■□□□□ 0.9
ATXN3P54252 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.68■□□□□ 0.9
ATXN3P54252 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ATXN3P54252 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.68■□□□□ 0.9
ATXN3P54252 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATXN3P54252 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.67■□□□□ 0.9
ATXN3P54252 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ATXN3P54252 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.67■□□□□ 0.9
ATXN3P54252 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.67■□□□□ 0.9
ATXN3P54252 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.67■□□□□ 0.9
ATXN3P54252 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.67■□□□□ 0.9
ATXN3P54252 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.67■□□□□ 0.9
ATXN3P54252 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.67■□□□□ 0.9
ATXN3P54252 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATXN3P54252 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.67■□□□□ 0.9
ATXN3P54252 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.67■□□□□ 0.9
ATXN3P54252 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.67■□□□□ 0.9
ATXN3P54252 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ATXN3P54252 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATXN3P54252 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATXN3P54252 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATXN3P54252 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.66■□□□□ 0.9
ATXN3P54252 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms