Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCNKAP51800 HLA-B-256ENST00000639848 1089 ntBASIC19.98■□□□□ 0.79
CLCNKAP51800 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.98■□□□□ 0.79
CLCNKAP51800 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CLCNKAP51800 AL137060.1-201ENST00000618151 2648 ntBASIC19.98■□□□□ 0.79
CLCNKAP51800 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLCNKAP51800 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.97■□□□□ 0.79
CLCNKAP51800 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
CLCNKAP51800 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCNKAP51800 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
CLCNKAP51800 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 ABHD17AP1-201ENST00000358206 933 ntBASIC19.97■□□□□ 0.79
CLCNKAP51800 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.97■□□□□ 0.79
CLCNKAP51800 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCNKAP51800 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.97■□□□□ 0.79
CLCNKAP51800 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CLCNKAP51800 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
CLCNKAP51800 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CLCNKAP51800 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.97■□□□□ 0.79
CLCNKAP51800 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLCNKAP51800 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 RNA5SP413-201ENST00000516373 109 ntBASIC19.96■□□□□ 0.79
CLCNKAP51800 C2orf69P4-201ENST00000565394 541 ntBASIC19.96■□□□□ 0.79
CLCNKAP51800 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 MIR2861-201ENST00000636310 90 ntBASIC19.96■□□□□ 0.79
CLCNKAP51800 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.96■□□□□ 0.79
CLCNKAP51800 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLCNKAP51800 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCNKAP51800 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.95■□□□□ 0.78
CLCNKAP51800 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLCNKAP51800 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCNKAP51800 AC060766.5-201ENST00000590539 871 ntBASIC19.95■□□□□ 0.78
CLCNKAP51800 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CLCNKAP51800 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCNKAP51800 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.95■□□□□ 0.78
CLCNKAP51800 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCNKAP51800 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.95■□□□□ 0.78
CLCNKAP51800 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLCNKAP51800 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.94■□□□□ 0.78
CLCNKAP51800 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.94■□□□□ 0.78
CLCNKAP51800 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCNKAP51800 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.94■□□□□ 0.78
CLCNKAP51800 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.94■□□□□ 0.78
CLCNKAP51800 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.94■□□□□ 0.78
CLCNKAP51800 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLCNKAP51800 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CLCNKAP51800 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLCNKAP51800 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CLCNKAP51800 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 AC006128.1-201ENST00000624704 1661 ntBASIC19.94■□□□□ 0.78
CLCNKAP51800 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLCNKAP51800 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLCNKAP51800 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLCNKAP51800 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.93■□□□□ 0.78
CLCNKAP51800 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.93■□□□□ 0.78
CLCNKAP51800 MIR4651-201ENST00000582622 73 ntBASIC19.93■□□□□ 0.78
CLCNKAP51800 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.93■□□□□ 0.78
CLCNKAP51800 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.93■□□□□ 0.78
CLCNKAP51800 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLCNKAP51800 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.92■□□□□ 0.78
CLCNKAP51800 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLCNKAP51800 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms