Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MECP2P51608 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MECP2P51608 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
MECP2P51608 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
MECP2P51608 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MECP2P51608 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
MECP2P51608 LETM1P2-201ENST00000597330 2178 ntBASIC17.33■□□□□ 0.37
MECP2P51608 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MECP2P51608 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
MECP2P51608 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
MECP2P51608 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
MECP2P51608 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
MECP2P51608 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
MECP2P51608 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.33■□□□□ 0.36
MECP2P51608 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
MECP2P51608 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
MECP2P51608 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
MECP2P51608 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
MECP2P51608 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.32■□□□□ 0.36
MECP2P51608 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.32■□□□□ 0.36
MECP2P51608 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MECP2P51608 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.32■□□□□ 0.36
MECP2P51608 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
MECP2P51608 AL356740.2-201ENST00000601559 647 ntBASIC17.32■□□□□ 0.36
MECP2P51608 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
MECP2P51608 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
MECP2P51608 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
MECP2P51608 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MECP2P51608 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.32■□□□□ 0.36
MECP2P51608 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
MECP2P51608 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
MECP2P51608 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.31■□□□□ 0.36
MECP2P51608 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.31■□□□□ 0.36
MECP2P51608 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.31■□□□□ 0.36
MECP2P51608 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
MECP2P51608 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
MECP2P51608 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.31■□□□□ 0.36
MECP2P51608 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
MECP2P51608 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
MECP2P51608 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
MECP2P51608 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.3■□□□□ 0.36
MECP2P51608 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
MECP2P51608 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.3■□□□□ 0.36
MECP2P51608 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.3■□□□□ 0.36
MECP2P51608 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.3■□□□□ 0.36
MECP2P51608 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.3■□□□□ 0.36
MECP2P51608 pRNA.6-201ENST00000610482 90 ntBASIC17.3■□□□□ 0.36
MECP2P51608 pRNA.5-201ENST00000612139 90 ntBASIC17.3■□□□□ 0.36
MECP2P51608 pRNA.11-201ENST00000618423 90 ntBASIC17.3■□□□□ 0.36
MECP2P51608 pRNA.13-201ENST00000619112 90 ntBASIC17.3■□□□□ 0.36
MECP2P51608 AC087239.1-201ENST00000622671 572 ntBASIC17.3■□□□□ 0.36
MECP2P51608 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
MECP2P51608 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 AC133637.1-201ENST00000624115 1537 ntBASIC17.3■□□□□ 0.36
MECP2P51608 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
MECP2P51608 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.29■□□□□ 0.36
MECP2P51608 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
MECP2P51608 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MECP2P51608 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
MECP2P51608 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
MECP2P51608 AC010141.3-201ENST00000456659 717 ntBASIC17.29■□□□□ 0.36
MECP2P51608 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.29■□□□□ 0.36
MECP2P51608 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.29■□□□□ 0.36
MECP2P51608 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms