Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.31■□□□□ 0.68
PRIM2P49643 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
PRIM2P49643 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRIM2P49643 AL391422.3-201ENST00000603791 2761 ntBASIC19.31■□□□□ 0.68
PRIM2P49643 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PRIM2P49643 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PRIM2P49643 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PRIM2P49643 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PRIM2P49643 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.3■□□□□ 0.68
PRIM2P49643 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PRIM2P49643 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.3■□□□□ 0.68
PRIM2P49643 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRIM2P49643 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PRIM2P49643 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.3■□□□□ 0.68
PRIM2P49643 RARRES2P6-201ENST00000567333 442 ntBASIC19.3■□□□□ 0.68
PRIM2P49643 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.3■□□□□ 0.68
PRIM2P49643 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.3■□□□□ 0.68
PRIM2P49643 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PRIM2P49643 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRIM2P49643 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.29■□□□□ 0.68
PRIM2P49643 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.29■□□□□ 0.68
PRIM2P49643 PCDHAC2-203ENST00000615316 3011 ntBASIC19.29■□□□□ 0.68
PRIM2P49643 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 AC026271.2-201ENST00000428091 497 ntBASIC19.29■□□□□ 0.68
PRIM2P49643 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.29■□□□□ 0.68
PRIM2P49643 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.29■□□□□ 0.68
PRIM2P49643 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRIM2P49643 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
PRIM2P49643 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRIM2P49643 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRIM2P49643 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.28■□□□□ 0.68
PRIM2P49643 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.28■□□□□ 0.68
PRIM2P49643 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.28■□□□□ 0.68
PRIM2P49643 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PRIM2P49643 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.28■□□□□ 0.68
PRIM2P49643 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.28■□□□□ 0.68
PRIM2P49643 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRIM2P49643 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.28■□□□□ 0.68
PRIM2P49643 SLC7A5P1-201ENST00000568957 537 ntBASIC19.28■□□□□ 0.68
PRIM2P49643 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.28■□□□□ 0.68
PRIM2P49643 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
PRIM2P49643 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PRIM2P49643 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PRIM2P49643 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRIM2P49643 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
PRIM2P49643 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
PRIM2P49643 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PRIM2P49643 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
PRIM2P49643 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.27■□□□□ 0.68
PRIM2P49643 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.27■□□□□ 0.68
PRIM2P49643 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.27■□□□□ 0.68
PRIM2P49643 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.27■□□□□ 0.68
PRIM2P49643 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.27■□□□□ 0.68
PRIM2P49643 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.27■□□□□ 0.68
PRIM2P49643 NTF6G-201ENST00000591094 616 ntBASIC19.27■□□□□ 0.68
PRIM2P49643 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PRIM2P49643 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms