Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 PAC1YOR269W 1485 nt1.5□□□□□ -2.17
RTR1P40084 YLR422WYLR422W 5799 nt1.5□□□□□ -2.17
RTR1P40084 YNL179CYNL179C 438 nt1.5□□□□□ -2.17
RTR1P40084 BRO1YPL084W 2535 nt1.5□□□□□ -2.17
RTR1P40084 MAD1YGL086W 2250 nt1.5□□□□□ -2.17
RTR1P40084 COX1Q0045 1605 nt1.49□□□□□ -2.17
RTR1P40084 AIM18YHR198C 966 nt1.49□□□□□ -2.17
RTR1P40084 YJL127C-BYJL127C-B 159 nt1.49□□□□□ -2.17
RTR1P40084 POL32YJR043C 1053 nt1.49□□□□□ -2.17
RTR1P40084 YAL064WYAL064W 285 nt1.49□□□□□ -2.17
RTR1P40084 EGD1YPL037C 474 nt1.49□□□□□ -2.17
RTR1P40084 VMR1YHL035C 4779 nt1.49□□□□□ -2.17
RTR1P40084 FRK1YPL141C 2598 nt1.48□□□□□ -2.17
RTR1P40084 HTB1YDR224C 396 nt1.48□□□□□ -2.17
RTR1P40084 YIP1YGR172C 747 nt1.48□□□□□ -2.17
RTR1P40084 CUP1-1YHR053C 186 nt1.48□□□□□ -2.17
RTR1P40084 CUP1-2YHR055C 186 nt1.48□□□□□ -2.17
RTR1P40084 HSK3YKL138C-A 210 nt1.48□□□□□ -2.17
RTR1P40084 ATP18YML081C-A 180 nt1.48□□□□□ -2.17
RTR1P40084 YNL010WYNL010W 726 nt1.48□□□□□ -2.17
RTR1P40084 RIO2YNL207W 1278 nt1.48□□□□□ -2.17
RTR1P40084 YPL119C-AYPL119C-A 264 nt1.48□□□□□ -2.17
RTR1P40084 ZRG8YER033C 3231 nt1.47□□□□□ -2.17
RTR1P40084 YSW1YBR148W 1830 nt1.47□□□□□ -2.17
RTR1P40084 ASM4YDL088C 1587 nt1.47□□□□□ -2.17
RTR1P40084 YCR102W-AYCR102W-A 198 nt1.47□□□□□ -2.17
RTR1P40084 YOR394C-AYOR394C-A 168 nt1.47□□□□□ -2.17
RTR1P40084 SPC29YPL124W 762 nt1.47□□□□□ -2.17
RTR1P40084 CDC27YBL084C 2277 nt1.47□□□□□ -2.17
RTR1P40084 SIP4YJL089W 2490 nt1.47□□□□□ -2.17
RTR1P40084 SPE1YKL184W 1401 nt1.47□□□□□ -2.17
RTR1P40084 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
RTR1P40084 HMI1YOL095C 2121 nt1.46□□□□□ -2.18
RTR1P40084 DAD1YDR016C 285 nt1.46□□□□□ -2.18
RTR1P40084 MZM1YDR493W 372 nt1.46□□□□□ -2.18
RTR1P40084 GIC1YHR061C 945 nt1.46□□□□□ -2.18
RTR1P40084 YHR214W-AYHR214W-A 486 nt1.46□□□□□ -2.18
RTR1P40084 YAR068WYAR068W 486 nt1.46□□□□□ -2.18
RTR1P40084 BST1YFL025C 3090 nt1.46□□□□□ -2.18
RTR1P40084 SPO75YLL005C 2607 nt1.46□□□□□ -2.18
RTR1P40084 DAS1YJL149W 1992 nt1.45□□□□□ -2.18
RTR1P40084 YCR016WYCR016W 873 nt1.45□□□□□ -2.18
RTR1P40084 YDR169C-AYDR169C-A 150 nt1.45□□□□□ -2.18
RTR1P40084 PAU2YEL049W 363 nt1.45□□□□□ -2.18
RTR1P40084 PAU12YGR294W 363 nt1.45□□□□□ -2.18
RTR1P40084 MCM22YJR135C 720 nt1.45□□□□□ -2.18
RTR1P40084 PAU18YLL064C 363 nt1.45□□□□□ -2.18
RTR1P40084 GPN3YLR243W 819 nt1.45□□□□□ -2.18
RTR1P40084 PAU6YNR076W 363 nt1.45□□□□□ -2.18
RTR1P40084 PAU24YBR301W 363 nt1.45□□□□□ -2.18
RTR1P40084 IRE1YHR079C 3348 nt1.45□□□□□ -2.18
RTR1P40084 HIR3YJR140C 4947 nt1.44□□□□□ -2.18
RTR1P40084 RSM28YDR494W 1086 nt1.44□□□□□ -2.18
RTR1P40084 RPL29YFR032C-A 180 nt1.44□□□□□ -2.18
RTR1P40084 RAD6YGL058W 519 nt1.44□□□□□ -2.18
RTR1P40084 CMC2YBL059C-A 330 nt1.44□□□□□ -2.18
RTR1P40084 PGA1YNL158W 597 nt1.44□□□□□ -2.18
RTR1P40084 RNR4YGR180C 1038 nt1.43□□□□□ -2.18
RTR1P40084 tV(UAC)BtV(UAC)B 74 nt1.43□□□□□ -2.18
RTR1P40084 tV(UAC)DtV(UAC)D 74 nt1.43□□□□□ -2.18
RTR1P40084 COX3Q0275 810 nt1.43□□□□□ -2.18
RTR1P40084 YOR029WYOR029W 336 nt1.43□□□□□ -2.18
RTR1P40084 YOR105WYOR105W 327 nt1.43□□□□□ -2.18
RTR1P40084 SNC2YOR327C 348 nt1.43□□□□□ -2.18
RTR1P40084 SHE9YDR393W 1371 nt1.43□□□□□ -2.18
RTR1P40084 UBP3YER151C 2739 nt1.43□□□□□ -2.18
RTR1P40084 POL5YEL055C 3069 nt1.43□□□□□ -2.18
RTR1P40084 MUD2YKL074C 1584 nt1.42□□□□□ -2.18
RTR1P40084 HYM1YKL189W 1200 nt1.42□□□□□ -2.18
RTR1P40084 15S_rRNA15S_rRNA 1649 nt1.41□□□□□ -2.18
RTR1P40084 VPS74YDR372C 1038 nt1.41□□□□□ -2.18
RTR1P40084 LAG1YHL003C 1236 nt1.41□□□□□ -2.18
RTR1P40084 YIR020C-BYIR020C-B 735 nt1.41□□□□□ -2.18
RTR1P40084 RPS30BYOR182C 192 nt1.41□□□□□ -2.18
RTR1P40084 MAK10YEL053C 2202 nt1.41□□□□□ -2.18
RTR1P40084 YGR250CYGR250C 2346 nt1.41□□□□□ -2.18
RTR1P40084 YPR117WYPR117W 7470 nt1.4□□□□□ -2.19
RTR1P40084 TMA20YER007C-A 546 nt1.4□□□□□ -2.19
RTR1P40084 YLR140WYLR140W 327 nt1.4□□□□□ -2.19
RTR1P40084 MTG1YMR097C 1104 nt1.4□□□□□ -2.19
RTR1P40084 SPR2YOR214C 711 nt1.4□□□□□ -2.19
RTR1P40084 YDR034C-CYDR034C-C 1317 nt1.4□□□□□ -2.19
RTR1P40084 YLR410W-AYLR410W-A 1317 nt1.4□□□□□ -2.19
RTR1P40084 MNL2YLR057W 2550 nt1.39□□□□□ -2.19
RTR1P40084 SEC21YNL287W 2808 nt1.39□□□□□ -2.19
RTR1P40084 YER088C-AYER088C-A 324 nt1.39□□□□□ -2.19
RTR1P40084 LOC1YFR001W 615 nt1.39□□□□□ -2.19
RTR1P40084 GEP7YGL057C 864 nt1.39□□□□□ -2.19
RTR1P40084 VOA1YGR106C 798 nt1.39□□□□□ -2.19
RTR1P40084 PEP8YJL053W 1140 nt1.39□□□□□ -2.19
RTR1P40084 TIF11YMR260C 462 nt1.39□□□□□ -2.19
RTR1P40084 CTR9YOL145C 3234 nt1.38□□□□□ -2.19
RTR1P40084 YGL042CYGL042C 306 nt1.38□□□□□ -2.19
RTR1P40084 BET4YJL031C 984 nt1.38□□□□□ -2.19
RTR1P40084 CMC1YKL137W 336 nt1.38□□□□□ -2.19
RTR1P40084 ROX1YPR065W 1107 nt1.38□□□□□ -2.19
RTR1P40084 HKR1YDR420W 5409 nt1.38□□□□□ -2.19
RTR1P40084 MDM32YOR147W 1869 nt1.37□□□□□ -2.19
RTR1P40084 PHS1YJL097W 654 nt1.37□□□□□ -2.19
RTR1P40084 YLR031WYLR031W 561 nt1.37□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 10.1 ms