Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHC1P29353 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.63■□□□□ 0.57
SHC1P29353 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC1P29353 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC1P29353 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHC1P29353 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
SHC1P29353 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC1P29353 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC1P29353 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC1P29353 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.62■□□□□ 0.57
SHC1P29353 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC1P29353 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.62■□□□□ 0.57
SHC1P29353 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC1P29353 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SHC1P29353 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.62■□□□□ 0.57
SHC1P29353 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHC1P29353 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SHC1P29353 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
SHC1P29353 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SHC1P29353 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHC1P29353 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SHC1P29353 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.61■□□□□ 0.57
SHC1P29353 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC1P29353 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC1P29353 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.61■□□□□ 0.57
SHC1P29353 AL591742.1-201ENST00000604433 565 ntBASIC18.61■□□□□ 0.57
SHC1P29353 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 AC007952.6-201ENST00000573168 2673 ntBASIC18.61■□□□□ 0.57
SHC1P29353 AC003957.1-201ENST00000625108 2673 ntBASIC18.61■□□□□ 0.57
SHC1P29353 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHC1P29353 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SHC1P29353 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC1P29353 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC1P29353 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC1P29353 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC1P29353 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC1P29353 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SHC1P29353 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.6■□□□□ 0.57
SHC1P29353 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.6■□□□□ 0.57
SHC1P29353 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHC1P29353 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC1P29353 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SHC1P29353 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC1P29353 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SHC1P29353 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.59■□□□□ 0.57
SHC1P29353 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SHC1P29353 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.59■□□□□ 0.57
SHC1P29353 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.59■□□□□ 0.57
SHC1P29353 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 PLK5-205ENST00000642079 1969 ntBASIC18.59■□□□□ 0.57
SHC1P29353 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHC1P29353 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.58■□□□□ 0.57
SHC1P29353 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHC1P29353 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHC1P29353 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SHC1P29353 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.58■□□□□ 0.57
SHC1P29353 RNF165-205ENST00000588679 2904 ntBASIC18.58■□□□□ 0.57
SHC1P29353 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHC1P29353 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SHC1P29353 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHC1P29353 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms