Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.71□□□□□ -1.825e-8■■■■□ 24.7
RPS3P23396 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.54■□□□□ 0.729e-7■■■■□ 24.7
RPS3P23396 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.529e-7■■■■□ 24.7
RPS3P23396 C2orf82-207ENST00000476690 490 ntTSL 324.18■■□□□ 1.462e-15■■■■□ 24.7
RPS3P23396 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.254e-7■■■■□ 24.7
RPS3P23396 MRPL10-204ENST00000421763 1576 ntTSL 220.95■□□□□ 0.944e-7■■■■□ 24.7
RPS3P23396 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.92■□□□□ 0.464e-7■■■■□ 24.7
RPS3P23396 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.835e-11■■■■□ 24.7
RPS3P23396 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.54■□□□□ 0.085e-11■■■■□ 24.7
RPS3P23396 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.19■□□□□ 0.025e-11■■■■□ 24.7
RPS3P23396 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.89□□□□□ -0.035e-11■■■■□ 24.7
RPS3P23396 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.53□□□□□ -0.085e-11■■■■□ 24.7
RPS3P23396 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.485e-11■■■■□ 24.7
RPS3P23396 NME1-210ENST00000512768 1056 ntTSL 1 (best)17.73■□□□□ 0.439e-9■■■■□ 24.7
RPS3P23396 CTNNA1-211ENST00000518910 572 ntTSL 411.94□□□□□ -0.52e-7■■■■□ 24.7
RPS3P23396 CTNNA1-215ENST00000519309 869 ntTSL 37.85□□□□□ -1.152e-7■■■■□ 24.7
RPS3P23396 ATP5B-208ENST00000551182 457 ntTSL 26.86□□□□□ -1.311e-21■■■■□ 24.7
RPS3P23396 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.739e-11■■■■□ 24.7
RPS3P23396 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.329e-11■■■■□ 24.7
RPS3P23396 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC13.56□□□□□ -0.249e-11■■■■□ 24.7
RPS3P23396 ANXA6-208ENST00000519644 728 ntTSL 514.06□□□□□ -0.163e-6■■■■□ 24.7
RPS3P23396 SERPINH1-210ENST00000528990 587 ntTSL 317.71■□□□□ 0.433e-8■■■■□ 24.7
RPS3P23396 CS-214ENST00000548849 1028 ntTSL 316.15■□□□□ 0.189e-7■■■■□ 24.6
RPS3P23396 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.769e-7■■■■□ 24.6
RPS3P23396 CS-205ENST00000546891 911 ntTSL 29.71□□□□□ -0.869e-7■■■■□ 24.6
RPS3P23396 CS-215ENST00000549143 2811 ntTSL 28.29□□□□□ -1.089e-7■■■■□ 24.6
RPS3P23396 CS-204ENST00000546621 1513 ntTSL 27.63□□□□□ -1.199e-7■■■■□ 24.6
RPS3P23396 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.03□□□□□ -1.289e-7■■■■□ 24.6
RPS3P23396 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.349e-7■■■■□ 24.6
RPS3P23396 SERPINH1-213ENST00000532356 998 ntTSL 318.22■□□□□ 0.512e-8■■■■□ 24.6
RPS3P23396 ANXA5-204ENST00000509016 556 ntTSL 48.54□□□□□ -1.049e-11■■■■□ 24.6
RPS3P23396 SELENOP-211ENST00000513303 714 ntTSL 212.46□□□□□ -0.417e-27■■■■□ 24.6
RPS3P23396 SELENOP-208ENST00000510965 787 ntTSL 511.71□□□□□ -0.537e-27■■■■□ 24.6
RPS3P23396 SELENOP-214ENST00000514985 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.677e-27■■■■□ 24.6
RPS3P23396 SELENOP-215ENST00000515626 566 ntTSL 49.87□□□□□ -0.837e-27■■■■□ 24.6
RPS3P23396 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.047e-27■■■■□ 24.6
RPS3P23396 SELENOP-202ENST00000506078 799 ntTSL 28.4□□□□□ -1.067e-27■■■■□ 24.6
RPS3P23396 SELENOP-203ENST00000506577 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.187e-27■■■■□ 24.6
RPS3P23396 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.57□□□□□ -1.27e-27■■■■□ 24.6
RPS3P23396 SELENOP-212ENST00000514218 1047 ntTSL 56.87□□□□□ -1.317e-27■■■■□ 24.6
RPS3P23396 SELENOP-210ENST00000512980 4175 ntTSL 26.71□□□□□ -1.337e-27■■■■□ 24.6
RPS3P23396 SELENOP-207ENST00000510650 580 ntTSL 33.21□□□□□ -1.97e-27■■■■□ 24.6
RPS3P23396 ALDH1B1-202ENST00000635162 584 ntTSL 316.98■□□□□ 0.313e-7■■■■□ 24.6
RPS3P23396 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.22e-13■■■■□ 24.6
RPS3P23396 PEBP1-202ENST00000542939 708 ntTSL 313.98□□□□□ -0.173e-13■■■■□ 24.6
RPS3P23396 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.811e-7■■■■□ 24.6
RPS3P23396 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.532e-7■■■■□ 24.6
RPS3P23396 YIF1B-208ENST00000587361 579 ntTSL 322.12■■□□□ 1.134e-7■■■■□ 24.6
RPS3P23396 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.85■□□□□ 0.775e-7■■■■□ 24.6
RPS3P23396 YIF1B-212ENST00000589644 1917 ntTSL 218.9■□□□□ 0.625e-7■■■■□ 24.6
RPS3P23396 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.432e-7■■■■□ 24.6
RPS3P23396 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.422e-7■■■■□ 24.6
RPS3P23396 YIF1B-205ENST00000585563 1118 ntTSL 317.38■□□□□ 0.375e-7■■■■□ 24.6
RPS3P23396 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.19■□□□□ 0.342e-7■■■■□ 24.6
RPS3P23396 YIF1B-211ENST00000589247 734 ntTSL 214.58□□□□□ -0.085e-7■■■■□ 24.6
RPS3P23396 YIF1B-209ENST00000588002 575 ntTSL 514.09□□□□□ -0.155e-7■■■■□ 24.6
RPS3P23396 BST2-203ENST00000533098 459 ntTSL 29.47□□□□□ -0.891e-6■■■■□ 24.6
RPS3P23396 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.211e-55■■■■□ 24.6
RPS3P23396 ZWINT-206ENST00000467523 663 ntTSL 512.41□□□□□ -0.421e-6■■■■□ 24.6
RPS3P23396 EIF3I-203ENST00000471486 825 ntTSL 210.46□□□□□ -0.732e-8■■■■□ 24.6
RPS3P23396 CORO7-PAM16-203ENST00000575334 3815 ntTSL 216.7■□□□□ 0.265e-6■■■■□ 24.6
RPS3P23396 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.05□□□□□ -0.165e-6■■■■□ 24.6
RPS3P23396 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.185e-6■■■■□ 24.6
RPS3P23396 CORO7-227ENST00000575714 2978 ntTSL 513.03□□□□□ -0.325e-6■■■■□ 24.6
RPS3P23396 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.445e-6■■■■□ 24.6
RPS3P23396 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC11.89□□□□□ -0.515e-6■■■■□ 24.6
RPS3P23396 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC11.85□□□□□ -0.511e-7■■■■□ 24.6
RPS3P23396 CORO7-208ENST00000571227 3578 ntTSL 511.84□□□□□ -0.515e-6■■■■□ 24.6
RPS3P23396 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.711e-7■■■■□ 24.6
RPS3P23396 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.961e-7■■■■□ 24.6
RPS3P23396 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.971e-7■■■■□ 24.6
RPS3P23396 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.091e-7■■■■□ 24.6
RPS3P23396 ITPA-204ENST00000460550 967 ntTSL 216.27■□□□□ 0.28e-12■■■■□ 24.6
RPS3P23396 ITPA-208ENST00000483354 1028 ntTSL 315.97■□□□□ 0.158e-12■■■■□ 24.6
RPS3P23396 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.97■□□□□ 0.158e-12■■■■□ 24.6
RPS3P23396 ITPA-209ENST00000490838 977 ntTSL 215.49■□□□□ 0.078e-12■■■■□ 24.6
RPS3P23396 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.068e-12■■■■□ 24.6
RPS3P23396 ITPA-207ENST00000472295 670 ntTSL 214.7□□□□□ -0.068e-12■■■■□ 24.6
RPS3P23396 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.7□□□□□ -0.068e-12■■■■□ 24.6
RPS3P23396 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.172e-7■■■■□ 24.6
RPS3P23396 PSMD13-202ENST00000382671 1489 ntTSL 1 (best)15.41■□□□□ 0.062e-7■■■■□ 24.6
RPS3P23396 PSMD13-204ENST00000525665 1632 ntTSL 515.06■□□□□ 02e-7■■■■□ 24.6
RPS3P23396 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.97□□□□□ -0.012e-7■■■■□ 24.6
RPS3P23396 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.83□□□□□ -0.042e-7■■■■□ 24.6
RPS3P23396 PSMD13-201ENST00000352303 1427 ntTSL 5 BASIC11.91□□□□□ -0.52e-7■■■■□ 24.6
RPS3P23396 PSMD13-205ENST00000526783 892 ntTSL 59.7□□□□□ -0.862e-7■■■■□ 24.6
RPS3P23396 DGAT2-209ENST00000605608 635 ntTSL 1 (best)18.02■□□□□ 0.482e-6■■■■□ 24.6
RPS3P23396 DGAT2-207ENST00000604935 618 ntTSL 412.24□□□□□ -0.452e-6■■■■□ 24.6
RPS3P23396 ANXA1-204ENST00000456643 799 ntTSL 54.92□□□□□ -1.623e-7■■■■□ 24.6
RPS3P23396 TMED10-207ENST00000622441 612 nt20.51■□□□□ 0.874e-25■■■■□ 24.6
RPS3P23396 ALDOA-223ENST00000567555 554 ntTSL 1 (best)15.32■□□□□ 0.044e-60■■■■□ 24.6
RPS3P23396 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.086e-7■■■■□ 24.6
RPS3P23396 FGG-208ENST00000465336 722 ntTSL 24.51□□□□□ -1.693e-20■■■■□ 24.6
RPS3P23396 FGG-207ENST00000464532 703 ntTSL 21.59□□□□□ -2.153e-20■■■■□ 24.6
RPS3P23396 FGG-210ENST00000473393 996 ntTSL 20.86□□□□□ -2.273e-20■■■■□ 24.6
RPS3P23396 FGG-211ENST00000484695 354 ntTSL 2-0.94□□□□□ -2.563e-20■■■■□ 24.6
RPS3P23396 TKFC-207ENST00000528061 555 ntTSL 313.85□□□□□ -0.191e-9■■■■□ 24.6
RPS3P23396 VCP-206ENST00000480327 884 ntTSL 58.85□□□□□ -0.992e-8■■■■□ 24.6
RPS3P23396 AL591806.3-202ENST00000470694 813 ntAPPRIS ALT2 TSL 218.54■□□□□ 0.567e-8■■■■□ 24.6
RPS3P23396 F10-207ENST00000498455 849 ntTSL 214.13□□□□□ -0.151e-6■■■■□ 24.6
Retrieved 100 of 24,271 protein–RNA pairs in 146.5 ms