Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 AC116050.2-201ENST00000612102 1779 ntBASIC19.88■□□□□ 0.77
CDH3P22223 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH3P22223 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH3P22223 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH3P22223 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH3P22223 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH3P22223 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.88■□□□□ 0.77
CDH3P22223 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.88■□□□□ 0.77
CDH3P22223 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH3P22223 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.88■□□□□ 0.77
CDH3P22223 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH3P22223 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDH3P22223 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH3P22223 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH3P22223 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH3P22223 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH3P22223 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH3P22223 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH3P22223 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDH3P22223 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CDH3P22223 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.87■□□□□ 0.77
CDH3P22223 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDH3P22223 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH3P22223 AC098934.4-201ENST00000564127 592 ntBASIC19.87■□□□□ 0.77
CDH3P22223 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.87■□□□□ 0.77
CDH3P22223 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH3P22223 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH3P22223 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDH3P22223 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.86■□□□□ 0.77
CDH3P22223 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.86■□□□□ 0.77
CDH3P22223 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.86■□□□□ 0.77
CDH3P22223 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH3P22223 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH3P22223 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH3P22223 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH3P22223 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CDH3P22223 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH3P22223 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
CDH3P22223 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDH3P22223 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH3P22223 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH3P22223 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH3P22223 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDH3P22223 AC073210.2-201ENST00000430369 194 ntBASIC19.85■□□□□ 0.77
CDH3P22223 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.85■□□□□ 0.77
CDH3P22223 AC092118.2-201ENST00000613495 667 ntBASIC19.85■□□□□ 0.77
CDH3P22223 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH3P22223 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH3P22223 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH3P22223 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CDH3P22223 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CDH3P22223 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDH3P22223 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH3P22223 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH3P22223 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH3P22223 LSM12P1-201ENST00000411836 588 ntBASIC19.84■□□□□ 0.77
CDH3P22223 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.84■□□□□ 0.77
CDH3P22223 AL355472.2-201ENST00000422958 438 ntBASIC19.84■□□□□ 0.77
CDH3P22223 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CDH3P22223 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.84■□□□□ 0.77
CDH3P22223 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.84■□□□□ 0.77
CDH3P22223 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH3P22223 AC100791.3-201ENST00000617619 330 ntBASIC19.84■□□□□ 0.77
CDH3P22223 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH3P22223 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms